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32 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. yags: modular GEE solver - yags is a modular solver for generalized estimating equations. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2009-01-04 12:17 |
1. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods |
- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-01-24 12:50 |
2. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Programming Language : R [Filter]
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Genetics [Filter]
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Registered: 2011-03-23 10:20 |
3. Distance Weighted Discrimination (DWD) - Distance Weighted Discrimination (DWD) is a machine learning tool similar to SVM but with better breakdown properties as the number of variables increases in relationship to the number of observations. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
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- Operating System : Microsoft : Windows [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Machine Learning : Support Vector Machines [Filter]
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Registered: 2011-10-21 13:31 |
4. Eagle for Genome-Wide Association Mappin - The Eagle package is an implementation of multiple-locus association mapping on a genome-wide scale. It can handle inbred or outbred study populations, populations of arbitrary unknown complexity, and data larger than the memory capacity of the computer. |
- Development Status : 1 - Planning [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Operating System : Microsoft : Windows [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
- Topic : Genetics : QTL Mapping [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2017-07-24 00:36 |
5. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure. |
- Environment : Console (Text Based) [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
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Registered: 2013-12-19 15:12 |
6. rgl: 3D visualization support - rgl development has moved to Github.
rgl is a 3D visualization system based on OpenGL. It provides a medium to high level interface for use in R, currently modelled on classic R graphics, with extensions to allow for interaction. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Other Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Programming Language : R [Filter]
- Topic : Graphics : Dynamic Graphics [Filter]
- Topic : Graphics : Graphics Systems [Filter]
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Registered: 2008-08-16 13:50 |
7. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Bioinformatics [Filter]
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Registered: 2014-11-28 09:55 |
8. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Operating System : Microsoft : Windows : Windows Vista [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
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Registered: 2010-04-01 17:54 |
9. SpatialExtremes - The SpatialExtremes package aims to develop tools for the modeling of spatial extremes. The knowledge of the univariate/multivariate distribution of extremes is not enough. This package will try to fill this gap. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : French [Filter]
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- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Other/Nonlisted Topic [Filter]
- Topic : Spatial Data & Statistics [Filter]
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Registered: 2008-10-04 11:03 |
10. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Operating System : Microsoft : Windows [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Machine Learning : Bayesian Methods [Filter]
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Registered: 2009-02-18 09:38 |
11. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : German [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : High Performance Computing [Filter]
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Registered: 2013-05-29 18:34 |
12. TSP - Traveling Salesperson Problem - Basic infrastructure and some algorithms for the traveling salesperson problem (TSP). The package is now maintained on github at http://github.com/mhahsler/TSP |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
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- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
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Registered: 2007-02-20 12:47 |
13. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2012-05-15 16:23 |
14. seriation - Infrastructure for seriation - Infrastructure for seriation with an implementation of several seriation/sequencing techniques to reorder matrices, dissimilarity matrices, and dendrograms. Seriation is now maintained on githup at http://github.com/mhahsler/seriation |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
- Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
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Registered: 2008-02-01 22:32 |
15. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
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Registered: 2009-02-18 10:01 |
16. Modelling Peaks Over Threshold - The project consists in developing functions for peaks over threshold modeling. Most of results come from the extreme value theory (EVT). The EVT is currently extensively used, mostly in environmental sciences and finance. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : French [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
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- Programming Language : R [Filter]
- Topic : Finance : Risk Management : Value at Risk [Filter]
- Topic : Other/Nonlisted Topic [Filter]
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Registered: 2007-09-21 14:29 |
17. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : German [Filter]
- Operating System : MacOS (Now Filtering)
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- Programming Language : C/C\+\+ [Filter]
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- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
18. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Programming Language : C/C\+\+ [Filter]
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- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2007-11-27 09:48 |
19. Isolation Forest - This package implements an anomaly detection method that detects data-anomalies using binary trees. Using the property that anomalies are more susceptible to isolation, anomalies can be detected as data points which have short expected path lengths. |
- Development Status : 3 - Alpha [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Programming Language : R [Filter]
- Topic : Machine Learning : Recursive Partitioning [Filter]
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Registered: 2009-07-14 06:02 |
32 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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