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Programming Language :: R [Remove This Filter]
Operating System :: POSIX :: Linux [Remove This Filter]
Topic :: Bioinformatics :: Statistics [Remove This Filter]
Development Status :: 4 - Beta [Remove This Filter]
License > OSI Approved > GNU General Public License (GPL) |
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10 projects in result set.
0. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs. | |
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Activity Percentile: 0.00 Registered: 2009-10-07 19:54 |
1. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. | |
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Activity Percentile: 0.00 Registered: 2013-11-21 21:46 |
2. Quasi-likelihood parameter estimation - The package provides methods for parameter estimation for statistical models that can be simulated. We follow a quasi-likelihood approach to estimate the unknown parameter by the root of the so-called quasi-score estimating function. | |
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Activity Percentile: 0.00 Registered: 2017-08-30 21:22 |
3. Evolution simulation and classification - After measuring gene frequencies of modern populations that have a common ancestor, we estimate ancestral allele frequency and selection state for each gene. A bayesian model is used and verified using the included simulator. | |
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Activity Percentile: 0.00 Registered: 2009-07-30 17:27 |
4. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor. | |
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Activity Percentile: 0.00 Registered: 2010-04-01 17:54 |
5. RMacoqui - RMacoqui develops a probability procedure for the identification of chorotypes, i.e. distribution patterns shared by a group of species, which can be operatively identified within an area (Baroni-Urbani et al., 1978). | |
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Activity Percentile: 0.00 Registered: 2015-07-04 09:37 |
6. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model. | |
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Activity Percentile: 0.00 Registered: 2012-07-03 03:50 |
7. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares. | |
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Activity Percentile: 0.00 Registered: 2012-07-12 22:01 |
8. Peirce - Illustrate Peirces criterion for rejection of outliers from a normal distribution. | |
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Activity Percentile: 0.00 Registered: 2012-09-07 07:56 |
9. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
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Activity Percentile: 0.00 Registered: 2010-03-05 10:51 |