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58 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. optparse, argparse: command line parsers - Development of getopt, optparse, and argparse has moved to Github. Try out http://www.github.com/trevorld/argparse, http://www.github.com/trevorld/optparse, or http://www.github.com/trevorld/getopt .
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Registered: 2009-07-22 19:43 |
1. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations
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Registered: 2011-02-02 00:51 |
2. linprog: Linear Programming/Optimization - This package can be used to solve Linear Programming / Linear optimization problems by using the simplex algorithm.
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Registered: 2009-12-25 16:29 |
3. waveslim: Wavelet methods for 1/2/3D - Basic wavelet routines for the processing/analysis/inference of time series, images and 3D arrays. The code provided here is based on Percival and Walden (2000); Gencay, Selcuk and Whitcher (2001); Kingsbury (1999); and Selesnick (200?).
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- Topic : Econometrics [Filter]
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Registered: 2009-02-26 17:20 |
4. Genotype Database Framework - GT.DB is a database framework for efficiently managing genome-wide genotype datasets (i.e. 10^6 or more biallelic markers, 1000s of samples), as well as underlying raw data and complex phenotype data, tightly integrated with R libraries for analysis.
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Registered: 2009-09-17 00:13 |
5. blupsurv - Tools for fitting proportional hazards models to clustered
recurrent events data. Nested frailties are modeled by their
best linear unbiased predictors under an auxiliary Poisson model.
Univariate and bivariate recurrent events processes are permitted.
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Registered: 2008-06-14 13:52 |
6. simecol - Ecological Models with R - simecol allows to implement ecological models (ODEs, IBMs, ...) using a template-like object-oriented stucture. It helps to organize scenarios and may also be useful for other areas.
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Registered: 2008-02-20 20:34 |
7. Bayesian Fractional Polynomials - The package implements the Bayesian paradigm for fractional polynomial models under the assumption of normally distributed error terms.
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Registered: 2009-09-23 10:25 |
8. gwidgets - The gWidgets API provides a standardized interface to several GUI toolkits accessible through R packages.
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Registered: 2010-04-28 01:04 |
9. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties.
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Registered: 2011-10-11 08:51 |
10. Functional - Curry, Compose, and other higher-order functions.
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Registered: 2010-02-19 15:44 |
11. Roxygen - Roxygen is a Doxygen-like documentation system for R; allowing in-source specification of Rd files, collation and namespace directives. Roclets (modular drivers) provide an extensibility layer.
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Registered: 2008-04-22 13:05 |
12. Parent-specific DNA copy numbers (abo) - Paired PSCBS: Parent-specific copy number in paired tumor-normal studies using circular binary segmentation (CBS).
Packages in this project: PSCBS.
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Registered: 2009-10-20 01:21 |
13. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis.
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Registered: 2011-09-26 05:04 |
14. R.* packages [MOVED TO GITHUB] - This repository and all of its packages have been moved to https://github.com/HenrikBengtsson/
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Registered: 2009-05-19 19:59 |
15. idbg - Idbg - R debugger
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Registered: 2010-07-04 19:29 |
16. DICOM: Import DICOM data via R - The DICOM package is a small collection of R functions to import binary data files (e.g., MRI, CT, PET, etc.) that conform to the DICOM Data Standard.
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Registered: 2009-05-29 21:29 |
17. Species Distribution Modelling - sdm is an extendable framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time.
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Registered: 2014-05-26 16:09 |
18. HAB bathymetry models - R implementation of the remote sensing based Hydraulically Assisted Bathymetry models (HAB) developed by Fonstad, M. & Marcus, W. (2005). Functions are provided for modelling with a range of custom variables. Summary functions are provided as well.
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Registered: 2009-05-08 10:01 |
19. R interface to GEOS - The package provides tools for interfacing the C++ translation of the Java Topology Suite (GEOS from JTS).
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Registered: 2009-11-11 10:55 |
58 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
