Software Map
Project Tree
Now limiting view to projects in the following categories:
Environment :: Console (Text Based) [Remove This Filter]
Natural Language :: English [Remove This Filter]
103 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. Generalized Multilevel Permutation Model - The gmpm package seeks to provide a comprehensive framework for performing synchronized permutation tests on multilevel experimental data. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Robust Statistics [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
|
Activity Percentile: 0.00
Registered: 2009-08-24 00:41 |
1. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-11 08:51 |
2. Non-Interactive Spatial Tools for Raster - S3 classes and methods for manipulation with georeferenced raster data: reading/writing, processing, multi-panel visualization.
This is deprecated version with compiled binaries. Actual sources are at GitHub: https://github.com/nplatonov/ursa. See CRAN for binaries. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Natural Language : Russian [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2017-03-17 09:29 |
3. linprog: Linear Programming/Optimization - This package can be used to solve Linear Programming / Linear optimization problems by using the simplex algorithm. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
|
Activity Percentile: 0.00
Registered: 2009-12-25 16:29 |
4. trip -- animal tracking data - The development of trip package is now hosted on GitHub,
https://github.com/mdsumner/trip
MDSumner 2013-07-04
Location estimation, track and spatial analysis for animal tag data. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-06-24 02:07 |
5. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : Other/Proprietary License [Filter]
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Computational Physics [Filter]
- Topic : Connectivity [Filter]
- Topic : High Performance Computing : Large Memory [Filter]
|
Registered: 2009-06-17 16:54 |
6. aroma.* packages [MOVED TO GITHUB] - This repository and all of its packages have been moved to https://github.com/HenrikBengtsson/ |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : No Input/Output (Daemon) [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- License : Other/Proprietary License [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Database [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-05-19 20:01 |
7. Multiple Comparisons procedures - Applies a wide range of multiple FDR controlling procedures.
Future versions will include more FWE controlling procedures as well as FDR. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : Public Domain [Filter]
- Natural Language : English (Now Filtering)
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2009-05-29 15:15 |
8. delftfews - delftfews is a timeseries library extending zoo. it aims at offering a usable base of functions for handling sets of time series in a water management framework. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2010-05-11 12:39 |
9. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
|
Activity Percentile: 0.00
Registered: 2010-04-01 17:54 |
10. DICOM: Import DICOM data via R - The DICOM package is a small collection of R functions to import binary data files (e.g., MRI, CT, PET, etc.) that conform to the DICOM Data Standard. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Registered: 2009-05-29 21:29 |
11. RpepXML - R pepXML is an R interface to the pepXML standard for MSMS data identification. It allows pepXML files to be imported into R and for easy manipulation and filtering. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : Other Environment [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : Artistic License [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-03 21:34 |
12. HAB bathymetry models - R implementation of the remote sensing based Hydraulically Assisted Bathymetry models (HAB) developed by Fonstad, M. & Marcus, W. (2005). Functions are provided for modelling with a range of custom variables. Summary functions are provided as well. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2009-05-08 10:01 |
13. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-02-08 16:57 |
14. klausuR: Multiple Choice Test Evaluation - A package to generate results of multiple choice tests: Detailed global results, anonymous/personalised feedback (LaTeX or PDF), item statistics like Cronbach's alpha or disciminatory power. Supports parallel test forms and partially answered items. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Natural Language : German [Filter]
- Programming Language : R [Filter]
- Topic : Education [Filter]
- Topic : Social Sciences [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-15 14:58 |
15. Profile Dirichlet Process Mixtures - This package facilitates profile inference for a class of product partition models (PPM). The Dirichlet process mixture is a specific case in this class. These methods search for the maximum posterior (MAP) estimate for the cluster partition in the PPM.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : General Model Fitting [Filter]
|
Activity Percentile: 0.00
Registered: 2009-04-24 15:56 |
16. Earth Mover Distance - EarthMovDist implements the Earth Movers distance in R. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- License : Other/Proprietary License [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-17 06:53 |
17. rneos: R interface to NEOS - R package that implements the XML-RPC interface to NEOS (http://www.neos-server.org) |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : BSD License [Filter]
- Natural Language : English (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : OS Independent [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Connectivity : WWW/HTTP [Filter]
- Topic : Finance [Filter]
- Topic : Optimization [Filter]
|
Activity Percentile: 0.00
Registered: 2010-07-16 15:32 |
18. Bayes factors - R functions for the computation of Bayes factors in common psychological experimental designs |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-09-29 14:02 |
19. Extreme Values in R (evir) - Extreme Value in R: Functions for extreme value theory, which may be divided into the following groups; exploratory data analysis, block maxima, peaks over thresholds (univariate and bivariate), point processes, gev/gpd distributions. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Risk Management [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-21 13:20 |
103 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>