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85 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
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Activity Percentile: 0.00
Registered: 2011-10-11 08:51 |
1. stringi - stringi is THE R package for correct, fast, convenient and consistent string processing in each locale |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Software Development [Filter]
- Topic : Text [Filter]
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Registered: 2012-12-31 11:09 |
2. vcf2geno: reading VCF made easy - Efficiently Read Variant Call Format (VCF) into R |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Database : R Interfaces [Filter]
- Topic : Text [Filter]
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Registered: 2012-08-22 01:29 |
3. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
4. pfda: Functional Principal Components - The PFDA package for R performs functional principal component analysis with B-splines for univariate and bivariate responses. Also handled are binary responses and an additive model for extra variables. |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Time Series [Filter]
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Registered: 2010-01-12 21:52 |
5. The adegenet package - The package adegenet is devoted to the multivariate analysis of genetic markers data. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Genetics : Population Genetics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics [Filter]
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Registered: 2008-01-06 17:38 |
6. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R [Filter]
- Topic : Computational Physics [Filter]
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Registered: 2014-06-28 12:14 |
7. digest - 'hash' arbitrary R objects - The digest package provides functions for the creation of `hash'
digests of arbitrary R objects using the md5, sha-1 and crc32
algorithms permitting easy comparison of R language objects. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
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Registered: 2008-03-01 16:25 |
8. Conditional Random Fields - This project provides a set of tools for conditional random fields tasks such as decoding/inference/sampling/training. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Graphical Models [Filter]
- Topic : Machine Learning [Filter]
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Registered: 2010-12-28 07:13 |
9. surveillance - The R package 'surveillance' implements statistical methods for the modeling and monitoring of time series of counts, proportions and categorical data, as well as for the modeling of continuous-time point processes of epidemic phenomena. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
- Topic : Time Series [Filter]
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Activity Percentile: 0.00
Registered: 2007-06-19 14:46 |
10. Yasomi: Self-Organising Map in R - Yasomi is Yet Another Self-Organising Map Implementation. It provides an implementation of Kohonen's SOM, with extension to kernel variants and comprehensive visualisation capabilities. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Cluster Analysis [Filter]
- Topic : Machine Learning : Neural Networks [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification [Filter]
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Registered: 2011-02-25 12:40 |
11. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : High Performance Computing [Filter]
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Registered: 2013-05-29 18:34 |
12. RQuantLib - R interface to QuantLib - The RQuantLib package provides an interface for GNU R to the QuantLib
library for modeling, trading, and risk management of financial assets. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Finance : Derivatives [Filter]
- Topic : Finance : Fixed Income [Filter]
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Activity Percentile: 0.00
Registered: 2008-01-01 18:41 |
13. TopKLists - The package includes tools for inference, aggregation, and visualization of multiple ranked lists. Consolidated information from two or more such lists comprising the same set of objects can be obtained. Incomplete rankings and partial lists are allowed. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Marketing & Business Analytics [Filter]
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Registered: 2010-05-06 10:59 |
14. blockmodeling - An R package for Generalized and classical blockmodeling of valued networks |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis [Filter]
- Topic : Social Sciences [Filter]
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Activity Percentile: 0.00
Registered: 2008-06-18 10:00 |
15. Rmetrics - Computational Finance - Rmetrics is an open source solution for teaching financial market analysis and valuation of financial instruments. With hundreds of functions build on modern methods, Rmetrics combines explorative data analysis and statistical modelling. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics [Filter]
- Topic : Education [Filter]
- Topic : Finance [Filter]
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Activity Percentile: 0.00
Registered: 2008-03-01 16:55 |
16. analogue - quantitative palaeoecology - analogue fits Modern Analogue Technique (MAT) and Weighted Averaging (WA) transfer function models for prediction of environmental data from species data. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Time Series [Filter]
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Registered: 2007-09-07 13:38 |
17. stream - data stream mining - A framework for data stream modeling and associated data mining tasks such as clustering and classification. Development of this package was supported in part by NSF IIS-0948893. Stream is now maintained on github at http://github.com/mhahsler/stream |
- Development Status : 4 - Beta [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis [Filter]
- Topic : Machine Learning [Filter]
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Registered: 2010-09-22 17:14 |
18. lme4 - Mixed-effects models - An R package for fitting and analyzing linear, nonlinear and generalized linear mixed models. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2007-08-17 17:27 |
19. RFLPtools - RFLPtools provides functions to analyse DNA fragment samples (i.e. derived from RFLP-analysis) and standalone BLAST report files (i.e. DNA sequence analysis). |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
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Activity Percentile: 0.00
Registered: 2010-02-24 09:24 |
85 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>