Software Map
Project Tree
Now limiting view to projects in the following categories:
Development Status :: 4 - Beta [Remove This Filter]
License :: OSI Approved :: GNU General Public License (GPL) [Remove This Filter]
Natural Language :: English [Remove This Filter]
239 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. simecol - Ecological Models with R - simecol allows to implement ecological models (ODEs, IBMs, ...) using a template-like object-oriented stucture. It helps to organize scenarios and may also be useful for other areas.
|
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Programming Language : Tcl [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Software Development [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 55.00
Registered: 2008-02-20 20:34 |
1. CHNOSZ - A package for thermodynamic modeling in geochemistry and biochemistry,
with functions for equilibrium activity diagrams and chemical affinities of reactions,
supported by an extensive thermodynamic database and group additivity for proteins.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Chemoinformatics [Filter]
|
Activity Percentile: 10.00
Registered: 2011-05-13 20:48 |
2. glmx: Generalized Linear Models Extended - Extensions for generalized linear models (GLMs), especially for binary responses, allowing for parametric links or heterogeneity in the latent variables.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Microeconometrics [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
|
Activity Percentile: 0.00
Registered: 2011-04-12 13:09 |
3. pmoments - The pmoments package implements both analytical and sample estimation of partial moments (upper/lower). In addition it provides for portfolio optimization using symmetric partial co-moment expectations in a quadratic context.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Finance : Risk Management [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions : Descriptive Measures [Filter]
|
Registered: 2008-12-07 21:47 |
4. Evolution simulation and classification - After measuring gene frequencies of modern populations that have a common ancestor, we estimate ancestral allele frequency and selection state for each gene. A bayesian model is used and verified using the included simulator.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : French [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Population Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-07-30 17:27 |
5. AtelieR - The AtelieR package is a collection of simulation and computation programs for statistical inference and bayesian model comparisons, with a GTK GUI. Specialized functions for automatic search of the best model by Bayes factors are provided.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : R Interfaces [Filter]
- Topic : Education : GUI [Filter]
|
Activity Percentile: 0.00
Registered: 2011-07-06 19:01 |
6. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Environment : Other Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Chemoinformatics [Filter]
- Topic : Graphical Models [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-04-25 17:27 |
7. RGoogleData - The package provides R access to Google services through the Google
supported Java API. Currently the R interface only
supports Google Docs and Spreadsheets, but other services will be added.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Connectivity [Filter]
|
Activity Percentile: 0.00
Registered: 2009-08-28 18:53 |
8. R2STATS: A GUI for GLM(M) - R2STATS is a gWidgetsRGtk2 GUI for fitting GLM and GLMM in R. It is intended to make model comparisons easy, for an arbitrary number of models. It also provide automatic plots for all models.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Education : GUI [Filter]
- Topic : Graphical User Interface [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-07-01 18:40 |
9. STARStools - "Spatial Technologies and Remote Sensing Tools" is a set of tools to assist in the manipulation and analysis of geospatial data.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-08-20 03:36 |
10. Integer and Nonlinear Optimization in R - The project "Integer and Nonlinear Optimization in R (RINO)" provides the packages Rbonmin, Rlago (both interfaces to MINP solvers) and solnp.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Nonlinear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
|
Activity Percentile: 0.00
Registered: 2008-03-14 14:49 |
11. optparse, argparse: command line parsers - Development of getopt, optparse, and argparse has moved to Github. Try out http://www.github.com/trevorld/argparse, http://www.github.com/trevorld/optparse, or http://www.github.com/trevorld/getopt .
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Software Development [Filter]
|
Registered: 2009-07-22 19:43 |
12. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : QTL Mapping [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
|
Activity Percentile: 0.00
Registered: 2009-10-02 07:07 |
13. gwidgets - The gWidgets API provides a standardized interface to several GUI toolkits accessible through R packages.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Other Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Graphical User Interface [Filter]
|
Activity Percentile: 0.00
Registered: 2010-04-28 01:04 |
14. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications : Gnome [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-08-18 03:20 |
15. Genotype Database Framework - GT.DB is a database framework for efficiently managing genome-wide genotype datasets (i.e. 10^6 or more biallelic markers, 1000s of samples), as well as underlying raw data and complex phenotype data, tightly integrated with R libraries for analysis.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Other Environment [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Other [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Database [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-09-17 00:13 |
16. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2011-06-23 07:05 |
17. Continuous Character Transitions - maticce: Mapping Transitions In Continuous Character Evolution
This project provides tools for an information-theoretic approach to estimating the probability of continuous character transitions on phylogenetic trees.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics : Phylogenetics [Filter]
|
Activity Percentile: 0.00
Registered: 2008-11-07 19:39 |
18. Species identity and evolution in R - A suite of tools for investigating the evolution, variation and identification of species. Includes functions for DNA barcoding, and sliding window analyses.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-04-15 00:09 |
19. GWASBinTests - Bin-based analysis of genome-wide association studies
Given an a priori partitioning of the genome into regions termed bins, GWASBinTests can compute
p-values (and FDRs) of several association tests.
|
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : French [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-07 17:59 |
239 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
