Software Map
Project Tree
Now limiting view to projects in the following categories:
Development Status :: 3 - Alpha [Remove This Filter]
Operating System :: OS Independent [Remove This Filter]
License :: OSI Approved :: GNU General Public License (GPL) [Remove This Filter]
82 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. geneNetBP - The geneNetBP package implements methods to predict, quantify and visualize system-wide changes in beliefs after absorbing evidence in genotype-phenotype networks inferred from eQTL data. |
- Development Status : 3 - Alpha (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Graphical Models [Filter]
- Topic : Graphics : Plotting [Filter]
|
Activity Percentile: 0.00
Registered: 2015-11-16 19:01 |
1. waveTiling - Perform transcriptome analysis from tiling array data by a wavelet-based functional model. |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-12-05 20:42 |
2. Quadratic programming modeling language - An intuitive modeling language for quadratic programs, and functions to generate the standard form matrices required to use solve.QP(). |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
- Topic : Software Development : Code Generators [Filter]
|
Registered: 2011-04-22 14:44 |
3. BayesR: Bayesian Regression - Developement of R Functions to Estimate Complex Bayesian Regression Models. |
- Development Status : 3 - Alpha (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : General Model Fitting [Filter]
- Topic : Regression Models [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-08-20 11:45 |
4. fxregime: Exchange Rate Regime Analysis - Frankel-Wei regression and structural change tools for estimating, testing, dating and monitoring (de facto) foreign exchange (FX) rate regimes. |
- Development Status : 3 - Alpha (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Econometrics : Structural Change [Filter]
- Topic : Finance [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2007-02-15 19:25 |
5. Analysis of Independent Contrasts - The CAIC package provides methods for the comparative analysis of taxa using independent contrasts methods. It reimplements the methods of the CAIC and MacroCAIC programs will implement alternative methods such as those provided in LDAP. |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics [Filter]
|
Activity Percentile: 0.00
Registered: 2008-01-31 15:29 |
6. Movement Analysis - Analysis of trajectory data. Compute home ranges, speed distributions and detect movement patterns based on the Brownian bridge movement model. |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2015-04-09 16:55 |
7. Entropy-based LISA - Provides the functions to quantify local spatial association using a novel entropy-based method, named Entropy-based Local Indicator of Spatial Association (ELSA). |
- Development Status : 3 - Alpha (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
|
Activity Percentile: 0.00
Registered: 2013-09-23 01:30 |
8. TIMP - TIMP is an R package for fitting superposition models that implements the partitioned variable projection algorithm. The package has been extensively applied to modeling spectroscopy and Fluorescence Lifetime Imaging Microscopy (FLIM) datasets. |
- Development Status : 3 - Alpha (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Computational Physics [Filter]
|
Activity Percentile: 0.00
Registered: 2007-04-30 21:06 |
9. TIMPGUI: early prototype GUI for TIMP - TIMPGUI was an early prototype GUI for the R-package TIMP, superseded by the Glotaran project (glotaran.org).
Depending on your use case, the R-package paramGUI may be a suitable alternative |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : Java [Filter]
- Topic : Computational Physics [Filter]
- Topic : Graphical User Interface [Filter]
|
Registered: 2007-06-15 19:53 |
10. brew - brew implements a templating framework for mixing text and R code for report generation. brew template syntax is similar to PHP, Ruby's erb module, Java Server Pages, and Python's psp module. |
- Development Status : 3 - Alpha (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Environment : No Input/Output (Daemon) [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Connectivity : WWW/HTTP [Filter]
- Topic : Software Development [Filter]
- Topic : Text [Filter]
|
Activity Percentile: 0.00
Registered: 2007-04-20 14:46 |
11. PhyloOrchard - This holds noteworthy chronograms. It serves as the tree store for the DateLife.org project but is available for anyone to use. |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Datasets [Filter]
- Topic : Genetics : Phylogenetics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-09-17 01:58 |
12. DeducerRichOutput - DeducerRichOutput provides HTML-based output for the analysis functions in Ian Fellows' Deducer package and enables navigation among output elements. |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Graphical User Interface [Filter]
|
Activity Percentile: 0.00
Registered: 2011-02-03 17:05 |
13. Bias reduction in GLMs - brglm provides brglm.fit which is an alternative method to glm.fit that works under the usual glm interface.
Estimation is either by correcting the bias of the maximum likelihood estimates or using an adjusted-score approach to improving bias. |
- Development Status : 3 - Alpha (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-08-20 14:19 |
14. Sweave previewer search support - This package supports previewer forward and reverse search between Sweave source and .dvi or .pdf output.
Development has been migrated to Github: https://github.com/dmurdoch/patchDVI |
- Development Status : 3 - Alpha (Now Filtering)
- Environment : Other Environment [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Graphical User Interface [Filter]
- Topic : Text : Word Processors [Filter]
|
Activity Percentile: 0.00
Registered: 2008-08-16 13:40 |
15. geoextras - Functions and data sets that complement the 'geo' package (also available on r-forge), much used at the Marine Research Institute, Reykjavík (Hafro), Iceland. |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Graphics : Plotting [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-04 23:11 |
16. EcoHydrology - A package containing a library of principle/fundamental equations used in the interdisciplinary field studying the complex interactions between hydrology and ecology (commonly referred to as Eco-Hydrology). |
- Development Status : 3 - Alpha (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-29 02:43 |
17. ORCME - ORCME project develops a package for order restricted clustering of microarray experiments. It reflects on-going research of the bioinformatics group within the Center for Statistics at UHasselt. |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
|
Activity Percentile: 0.00
Registered: 2008-08-21 11:49 |
18. Quantitative Fitness Analysis - QFA is an experimental and computational methodology for estimation of the fitnesses of arrayed microbial cultures growing on solid agar. Methods for estimating fitnesses, fitness variability and genetic interaction strengths are included. |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : General Model Fitting [Filter]
- Topic : Bioinformatics : Mathematics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-06 17:05 |
19. Gauss-Seidel Estimation of GLMM - This project implements a block-wise Gauss-Seidel (GS) algorithm to fit Generalized Linear Mixed Models (GLMMs). The GS algorithm allows for a significant performance increase and memory saving. |
- Development Status : 3 - Alpha (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-05-11 13:44 |
82 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>