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58 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations
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Registered: 2011-02-02 00:51 |
1. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-06-23 07:05 |
2. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
3. Isolation Forest - This package implements an anomaly detection method that detects data-anomalies using binary trees. Using the property that anomalies are more susceptible to isolation, anomalies can be detected as data points which have short expected path lengths.
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- Topic : Machine Learning : Recursive Partitioning [Filter]
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Registered: 2009-07-14 06:02 |
4. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.
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- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2011-06-10 12:13 |
5. Patchwork - Allele-specific Copy-number analysis for whole-genome sequenced data in CompleteGenomics or BAM format.
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- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2011-10-31 13:53 |
6. Simulation of clustered multi-state data - R functions implementing the simulation procedure proposed at
http://www.slideshare.net/federicorotolo/a-copulabased-simulation-method-for-clustered-multistate-survival-data
to generate survival data with a clustered and multi-state structure.
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- Topic : Multivariate Statistics : Multivariate Distributions : Copulae [Filter]
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Registered: 2011-12-03 10:40 |
7. Parametric Frailty Models - Parametric Frailty Models, fitted by maximum marginal likelihood method.
Possible basline hazards: Weibull, Exponential, Gompertz, logNormal and loglogistic
Possible Frailty distributions: Gamma, Inverse Gaussian and Positive Stable
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Registered: 2011-10-28 16:21 |
8. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis.
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Registered: 2011-09-26 05:04 |
9. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).
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- Programming Language : R [Filter]
- Programming Language : Tcl [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2011-05-10 20:54 |
10. IPMpack - IPMpack uses demographic vital rate data and (optionally) environmental data to build integral projection models. The package includes diagnostic routines, provides classic matrix model output, and produces post-hoc metrics (e.g., life expectancy).
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Registered: 2011-12-10 16:04 |
11. TravelR (Travel Demand Modeling in R) - The TravelR project hosts tools for building travel demand models in R, including highway assignment with useful practical features such as multi-class equilibrium assignment, network turn penalties, select link analysis, and network skims.
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Registered: 2010-04-14 18:34 |
12. Multilevel frailty models - Semiparametric proportional hazard models with K random effects, estimated via the EM-PL algorithm (Horny, 2009)
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Registered: 2012-04-30 07:14 |
13. SMfSB - R code associated with the second and third editions of the book Stochastic Modelling for Systems Biology, by Darren J Wilkinson, published by Chapman & Hall/CRC Press.
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2011-02-18 14:08 |
14. l2boost - Efficient boosting method using the l2-loss function with gradient descent along coordinate direction basis functions for linear regression.
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- Topic : Machine Learning : Boosting [Filter]
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Registered: 2012-05-01 11:39 |
15. data management R Tools - The "dmRTools" package is collection of functions can be used in a clinical trials data management system.
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2011-10-10 21:38 |
16. First Passage Times - Simulation and inference for diffusion processes in the presence of thresholds.
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- Topic : Numerical Analysis : Prob\. Methods, Simulation and Stochastic Differential Equations [Filter]
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Registered: 2012-05-22 09:20 |
17. Dependency modeling toolbox - Model-based tools for the discovery and analysis of statistical dependencies between data sources.
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- Topic : Machine Learning : Bayesian Methods [Filter]
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Registered: 2010-04-08 11:22 |
18. Micro-magnet Dynamics Simulation Package - Magnets is a numerical simulation package aiming at helping physicists
and electrical engineers who are interested in studying the micro-magnet spin system, which is one of the future integrated circuits with the privilege of low energy consumption.
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Registered: 2010-05-05 23:51 |
19. R2jags - A package for running jags from R
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Registered: 2008-05-10 19:19 |
58 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
