Software Map
Project Tree
Now limiting view to projects in the following categories:
Topic :: Biostatistics & Medical Statistics [Remove This Filter]
Programming Language :: R [Remove This Filter]
68 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. lefko3: matrix projection models - Project lefko3 is intended to provided utilities to estimate and analyze population matrix projection models (MPMs). Its focus is on the development of historical MPMs, including raw and function-based, but also develops normal, "ahistorical" MPMs, age-by-stage MPMs, and integral projection models (IPMs). |
- Development Status : 6 - Mature [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Environmetrics [Filter]
|
Activity Percentile: 0.00
Registered: 2021-07-15 19:48 |
1. twKinresp - Fitting kinetic models to microbial respiration data.
April 2019: Package twKinresp has been moved to github:
https://github.com/bgctw/twKinresp
April 2018: Package twNlme has been moved to github:
https://github.com/bgctw/twNlme/
The package versions here are kept for history, but are outdated.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Environmetrics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-15 16:23 |
2. Lifetable Calculations - Allows the calculation of lifetables using demographic methods, and particularly the estimation of life expectancy in people at increased relative risk and excess risk of death. Status - Working, but only limited features. Email for now if you want it. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2007-08-12 12:32 |
3. Regression Modeling Strategies - Regression modeling, testing, estimation, validation, graphics, prediction, and typesetting by storing enhanced model design attributes in the fit. rms is a collection of 229 functions that assist with and streamline modeling. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Graphics : Applications [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-22 19:09 |
4. Intaclass Correlation Coefficient - The package provides functions to assist in the estimation of the Intraclass Correlation Coefficient (ICC) under different experimental designs. The goal is to provide tools when making parameter estimates of the ICC. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : Public Domain [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2011-02-02 05:33 |
5. immunoassay - The purpose of this project is to allow fine-tuning of sigmoidal models beyond the limits of instrument software; and to provide functions for batch processing of output files and creation of reports with nice graphics. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-17 12:58 |
6. DiagnosisMed - DiagnosisMed is a package to analyze data from diagnostic test accuracy research evaluating health conditions. |
- Development Status : 1 - Planning [Filter]
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2008-09-19 23:16 |
7. Rniftilib - Rniftilib provides an interface to the niftilib C-library (http://niftilib.sourceforge.net/). |
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2009-05-18 12:23 |
8. CRImage - CRImage is a package to process and analyze biological images. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-06-27 11:26 |
9. HTSanalyzeR - HTSanalyzeR provides state-of-the-art analysis methods of pathway and network enrichment for High-Throughput Screens in a unified framework and provides easy-to-understand HTML output |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-06-28 19:28 |
10. mediation - An important goal of social science research is the analysis of causal mechanisms, where mediation analysis is a common tool. We provide tools for mediation analysis that span different models as well tools for sensitivity analyses. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Regression Models [Filter]
- Topic : Social Sciences [Filter]
|
Activity Percentile: 0.00
Registered: 2011-04-19 18:26 |
11. TNA Relative Neutralization Activity - Estimates relative neutralization activity (RNA) for serum samples tested in the toxin neutralization assay (TNA). Implements data reduction algorithm described in Omland et al. (in prep.) |
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : Public Domain [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2011-05-12 01:16 |
12. diagnosis - An R package for evaluation of the accuracy of diagnostic tests or biomarkers for classification (screening or diagnosis) and prediction (risk or prognosis). |
- Development Status : 1 - Planning [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2009-03-08 23:28 |
13. Activated Region Fitting - Activated Region Fitting (ARF) is a program for functional Magnetic Resonance Imaging (fMRI) data analysis. ARF uses Gaussian shape spatial models to parameterize active brain regions. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2008-09-18 11:23 |
14. GWASBinTests - Bin-based analysis of genome-wide association studies
Given an a priori partitioning of the genome into regions termed bins, GWASBinTests can compute
p-values (and FDRs) of several association tests. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2011-10-07 17:59 |
15. Trimmed Spearman-Karber Method - Simple nonparametric method to determine median effective doses (LD50, etc.) from dose-response curves. THIS PROJECT HAS MOVED TO https://github.com/brsr/tsk |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Environmetrics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-07-24 17:57 |
16. FFD - Freedom From Disease - The project provides tools for two-stage surveys to substantiate freedom from disease using imperfect diagnostic tests. Risk based sampling and a graphical user interface (GUI) are implemented. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-07-15 14:07 |
17. Metrum Research Group - Pharmacometric tools for data preparation, modeling and simulation, plotting, reporting, and file system administration. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2011-09-06 18:02 |
18. Rigorous Analytics - Software for the quantitative analysis of medical imaging data. Medical imaging data formats include DICOM, AFNI, ANALYZE and NIfTI. |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : BSD License [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-01-18 10:18 |
19. Order-Restricted Inference (ori) - The ori package intends to cover order-restricted inference
as described in the books by Barlow et al. (1972) and Robertson
et al. (1988). |
- Development Status : 2 - Pre-Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2007-08-05 18:10 |
68 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>