Software Map
Project Tree
Now limiting view to projects in the following categories:
Topic :: Biostatistics & Medical Statistics [Remove This Filter]
Natural Language :: English [Remove This Filter]
License :: OSI Approved :: GNU General Public License (GPL) [Remove This Filter]
22 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. HaarSeg [MOVED TO GITHUB] - This repository and its package has been moved to <https://github.com/HenrikBengtsson/HaarSeg>
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2009-06-05 00:29 |
1. DiagnosisMed - DiagnosisMed is a package to analyze data from diagnostic test accuracy research evaluating health conditions.
|
- Development Status : 1 - Planning [Filter]
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2008-09-19 23:16 |
2. DICOM: Import DICOM data via R - The DICOM package is a small collection of R functions to import binary data files (e.g., MRI, CT, PET, etc.) that conform to the DICOM Data Standard.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Other/Nonlisted Topic [Filter]
|
Registered: 2009-05-29 21:29 |
3. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Perl [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2013-11-21 21:46 |
4. lethal - Compute lethal doses for count data based on generalized additive models (GAMs) together with parametric bootstrap confidence intervals for the lethal dose.
For a current development version see https://github.com/hofnerb/lethal
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
- Topic : Regression Models [Filter]
|
Registered: 2014-02-28 13:11 |
5. qualV - Qualitative Validation Criteria - Package qualV provides quantitative and qualitative criteria to compare models with data and to measure similarity of patterns. Specific attention is payed to problems with systematic differences and time shifts.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2008-02-28 15:45 |
6. Meta-Analysis of Diagnostic Accuracy - The mada package (Meta-Analysis of Diagnostic Accuracy) provides model fitting functions for diagnostic accuracy data. This includes the bivariate model of Reitsma et al. (2005) which is equivalent to the HSROC by Rutter&Gatsonis (2001).
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Social Sciences [Filter]
|
Activity Percentile: 0.00
Registered: 2012-01-25 11:07 |
7. twKinresp - Fitting kinetic models to microbial respiration data.
April 2019: Package twKinresp has been moved to github:
https://github.com/bgctw/twKinresp
April 2018: Package twNlme has been moved to github:
https://github.com/bgctw/twNlme/
The package versions here are kept for history, but are outdated.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Environmetrics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-15 16:23 |
8. GWASBinTests - Bin-based analysis of genome-wide association studies
Given an a priori partitioning of the genome into regions termed bins, GWASBinTests can compute
p-values (and FDRs) of several association tests.
|
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : French [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2011-10-07 17:59 |
9. CRImage - CRImage is a package to process and analyze biological images.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-06-27 11:26 |
10. HTSanalyzeR - HTSanalyzeR provides state-of-the-art analysis methods of pathway and network enrichment for High-Throughput Screens in a unified framework and provides easy-to-understand HTML output
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-06-28 19:28 |
11. Animal - The Animal package is intended as tool for analyzing time coded behavioral observation and other ethological data. The project aims to promote the use of R in the the animal sciences and to provide easy to use functions for the researches in the field.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Finance : Data and Date Management [Filter]
|
Activity Percentile: 0.00
Registered: 2009-03-25 08:04 |
12. blupsurv - Tools for fitting proportional hazards models to clustered
recurrent events data. Nested frailties are modeled by their
best linear unbiased predictors under an auxiliary Poisson model.
Univariate and bivariate recurrent events processes are permitted.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Multivariate Statistics [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2008-06-14 13:52 |
13. immunoassay - The purpose of this project is to allow fine-tuning of sigmoidal models beyond the limits of instrument software; and to provide functions for batch processing of output files and creation of reports with nice graphics.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-17 12:58 |
14. FFD - Freedom From Disease - The project provides tools for two-stage surveys to substantiate freedom from disease using imperfect diagnostic tests. Risk based sampling and a graphical user interface (GUI) are implemented.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-07-15 14:07 |
15. Physical activity with accelerometers - The package pawacc collects functions to read, process and store accelerometer files. Models supported: Actigraph GT1M, GT3X and ActiSleep.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2012-09-03 15:45 |
16. Statistical methods for visual fields - a collection of tools for analyzing the field of vision. It provides a framework for development and use of innovative methods for visualisation, statistical analysis, and clinical interpretation of visual field loss and its change over time
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Graphical Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-14 00:24 |
17. Subject Randomization System - SRS is a Subject Randomization System based on the paper by Pocock and
Simon (Biometrics, 1975). It follows the development in the paper rather
closely. We hope to develop it further in light of comments and suggestions that we have received.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2009-09-17 23:28 |
18. Causal Effects Sensitivity Analysis - Graphical Sensitivity Analysis for Assessing Surrogate Endpoints via Causal Inference
|
- Development Status : 4 - Beta [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2013-02-22 01:18 |
19. flexsurv: Flexible survival models - The "flexsurv" package for flexible parametric survival models, including splines, generalized gamma / F, and extensible to user-defined models. This site contains versions up to 0.3.1 - development is now on github.com/chjackson/flexsurv-dev
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2013-04-04 11:25 |
22 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
