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7 projects in result set.
0. SPecies' LImits by Threshold Statistics - splits contains tools for delimiting species and automated taxonomy at many levels of biological organization (eg. DNA barcoding, morphometrics), top-down (merging phylogenetic and phylogeographic methods) and bottom-up (single samples into >1 groups). Newer versions of the package via the Project Home Page link below.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Genetics : Phylogenetics (Now Filtering)
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Registered: 2009-01-15 14:06 |
1. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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Registered: 2011-04-26 02:20 |
2. Analysis of Independent Contrasts - The CAIC package provides methods for the comparative analysis of taxa using independent contrasts methods. It reimplements the methods of the CAIC and MacroCAIC programs will implement alternative methods such as those provided in LDAP.
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Registered: 2008-01-31 15:29 |
3. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl
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- Development Status : 3 - Alpha [Filter]
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- Topic : Genetics : Population Genetics [Filter]
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Registered: 2011-06-14 14:51 |
4. adephylo - The package 'adephylo' implements multivariate approaches for comparative data, i.e. data including one phylogeny and one or several traits.
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- Development Status : 4 - Beta [Filter]
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- Topic : Multivariate Statistics : Projection Methods [Filter]
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Registered: 2008-11-18 15:35 |
5. RMesquite - RMesquite establishes interoperability between Mesquite (http://mesquiteproject.org) and R. It exposes Mesquite methods transparently as R functions that consume and provide native R data types, and converts seamlessly between Java and R data types.
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Registered: 2008-07-17 03:57 |
6. phylobase - Defining the basic S4 classes and methods for representing and manipulating phylogenetic trees and data in R.
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Registered: 2007-12-14 19:17 |
