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69 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Rigorous Analytics - Software for the quantitative analysis of medical imaging data. Medical imaging data formats include DICOM, AFNI, ANALYZE and NIfTI. |
- Development Status : 3 - Alpha (Now Filtering)
- Development Status : 4 - Beta [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2010-01-18 10:18 |
1. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm. |
- Development Status : 3 - Alpha (Now Filtering)
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- Topic : Bayesian Statistics [Filter]
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- Topic : Graphical Models [Filter]
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Registered: 2011-01-07 17:53 |
2. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers. |
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2011-11-04 17:46 |
3. Quantmod extension for Russian market - This is an extension for quantmod framework to simplify working with Russian stock market. Adds additional datas to work with MOEX (Moscow Exchange) using finam.ru and mfd.ru datasources. |
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- Natural Language : Russian [Filter]
- Operating System : OS Independent [Filter]
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- Topic : Finance : Data and Date Management [Filter]
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Registered: 2011-08-02 08:18 |
4. quantmod: financial modelling - Designed to bring fast, full, and extensible access of R statistical tools to the quantitative developer.
This project has moved from R-Forge to GitHub:
https://github.com/joshuaulrich/quantmod |
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- Programming Language : Fortran [Filter]
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- Topic : Econometrics [Filter]
- Topic : Finance : Data and Date Management [Filter]
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Registered: 2008-01-10 19:53 |
5. Quantitative Fitness Analysis - QFA is an experimental and computational methodology for estimation of the fitnesses of arrayed microbial cultures growing on solid agar. Methods for estimating fitnesses, fitness variability and genetic interaction strengths are included. |
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Bayesian Statistics : General Model Fitting [Filter]
- Topic : Bioinformatics : Mathematics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2010-09-06 17:05 |
6. Bias reduction in GLMs - brglm provides brglm.fit which is an alternative method to glm.fit that works under the usual glm interface.
Estimation is either by correcting the bias of the maximum likelihood estimates or using an adjusted-score approach to improving bias. |
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- Topic : Regression Models [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2011-08-20 14:19 |
7. ggcluster - plot cluster data w/ ggplot2 - Tools for creating cluster plots, tree plots and dendrograms using ggplot.
ggcluster provides a convenient, generic extractor function that can handle dendrogram, tree, kmeans, hclust and Mclust objects. |
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- Topic : Cluster Analysis [Filter]
- Topic : Graphics : Plotting [Filter]
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Registered: 2011-07-13 08:40 |
8. RevoExts - RevoExts is a project for open-source, third-party packages extending Revolution Analytics' RevoScaleR. |
- Development Status : 2 - Pre-Alpha [Filter]
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- Operating System : Microsoft : Windows : Windows Vista [Filter]
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Registered: 2011-05-09 17:31 |
9. Analysis of Independent Contrasts - The CAIC package provides methods for the comparative analysis of taxa using independent contrasts methods. It reimplements the methods of the CAIC and MacroCAIC programs will implement alternative methods such as those provided in LDAP. |
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2008-01-31 15:29 |
10. Quadratic programming modeling language - An intuitive modeling language for quadratic programs, and functions to generate the standard form matrices required to use solve.QP(). |
- Development Status : 3 - Alpha (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
- Topic : Software Development : Code Generators [Filter]
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Registered: 2011-04-22 14:44 |
11. COXMEG - COXMEG provides a tool to fit a Cox mixed-effects model, incorporating fast algorithms for genome-wide association analysis. |
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- Topic : Bioinformatics [Filter]
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Registered: 2019-08-02 18:19 |
12. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-04-26 02:20 |
13. Bertin matrices - Matrix manipulation and display, following the proposals of J. Bertin.
Bertin’s permutation matrices give simple and effective tools for the graphical analysis of data matrices or tables. |
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
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- Topic : Graphics : Applications [Filter]
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Registered: 2007-11-29 20:50 |
14. Parent-specific DNA copy numbers (abo) - Paired PSCBS: Parent-specific copy number in paired tumor-normal studies using circular binary segmentation (CBS).
Packages in this project: PSCBS. |
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Registered: 2009-10-20 01:21 |
15. hkey - access to the Windows registry - NOTE: CONSIDER USING library(tcltk);tcl("registry", ...) INSTEAD.
Supports query, create, modify and delete on nodes and values via overloaded R list indexing/assignment operators. Does automatic registry <--> R type conversion. |
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Registered: 2008-04-08 14:26 |
16. Rshare: the shared environment package - The Rshare package allows for a version of interprocess communication between separate R processes. This is facilitated through a shared environment hosted in one R session to which other R processes may subscribe. |
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- Topic : Connectivity [Filter]
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Registered: 2012-07-03 04:36 |
17. Robust time series analysis - Provides various approaches for robust estimation of (partial) autocorrelation and autocovariance. There are also procedures for robust fitting and filtering of AR(p) processes as well as for robust change point detection. |
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- Topic : Robust Statistics [Filter]
- Topic : Time Series [Filter]
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Registered: 2014-11-11 15:14 |
18. Diagnostic and prognostic meta-analysis - This package provides functions for diagnostic and prognostic meta-analyses. It estimates univariate, bivariate and multivariate models, and allows the aggregation of previously published prediction models with new data. |
- Development Status : 3 - Alpha (Now Filtering)
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Regression Models [Filter]
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Registered: 2012-08-09 13:01 |
19. Multiprecision Complex Number Arithmetic - An interface to the mpc library for the arithmetic of complex numbers with arbitrarily high precision and correct rounding of the result. |
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- Topic : Numerical Analysis : Numerical Methods in Complex Analysis [Filter]
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Registered: 2011-03-30 06:37 |
69 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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