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51 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. cvrcalc - A Cardiovascular Risk's Calculator by Scores
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Registered: 2013-08-02 12:18 |
1. msap - The package msap provides a easy way to analyse MSAP (Methylation-Sensible Amplified Polymorphism) data in order to asses epigenetic and genetic differences between groups of samples.
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Registered: 2012-06-13 23:35 |
2. SMfSB - R code associated with the second and third editions of the book Stochastic Modelling for Systems Biology, by Darren J Wilkinson, published by Chapman & Hall/CRC Press.
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
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Registered: 2011-02-18 14:08 |
3. Range Correlations - Methods from spatial statistics are adapted and implemented to be used for assessing marginal and partial correlations in range and site data (positional data) along genomes based on the Bioconductor package GenomicRanges.
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Registered: 2011-03-07 18:54 |
4. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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Registered: 2013-11-21 21:46 |
5. mixOmics - mixOmics is an R package that supplies different methodologies to unravel relationships between two heterogeneous data sets of size n × p and n × q where the p and q variables are measured on the same samples or individuals n.
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Registered: 2010-06-25 04:17 |
6. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares.
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Registered: 2012-07-12 22:01 |
7. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
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Registered: 2013-12-19 15:12 |
8. NewmanOmics - Develop and implement extensions to the Newman studentized range statistic that can be applied to transcriptomic data
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Registered: 2017-02-15 20:58 |
9. OOMPA - OOMPA is a suite of R packages for the analysis of gene expression (RNA), proteomics profiling , and other high throughput molecular biology data. OOMPA uses S4 classes to construct object-oriented tools with a consistent user interface.
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Registered: 2013-08-29 17:48 |
10. UMPIRE - UMPIRE provides tools to simulate realistic biological expression data. It includes additive and multiplicative noise, correlated expression, inactive genes, and a link to outcome data that incorporates the multi-hit cancer model.
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Registered: 2014-02-03 16:37 |
11. Class Prediction - A suite of packages that can bu used for "class prediction" problems. Includes tools to standardize training-testing regimens and cross-validation schemes.
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Registered: 2014-02-03 16:15 |
12. Tools for analysis of epigenomic data - Useful functions for quality assessment, visualization, summarization and statistical analysis of epigenomics experiments.
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- Development Status : 4 - Beta [Filter]
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Registered: 2010-03-10 09:59 |
13. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures
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Registered: 2009-04-17 15:10 |
14. GWASBinTests - Bin-based analysis of genome-wide association studies
Given an a priori partitioning of the genome into regions termed bins, GWASBinTests can compute
p-values (and FDRs) of several association tests.
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Registered: 2011-10-07 17:59 |
15. Layered and chained mixture models - Layered and chained mixture models for various univariate and multivariate distributions.
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Registered: 2011-05-10 07:45 |
16. modEvA - modEvA is an R package for species distribution model evaluation and analysis.
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Registered: 2014-04-04 11:51 |
17. waveTiling - Perform transcriptome analysis from tiling array data by a wavelet-based functional model.
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Registered: 2011-12-05 20:42 |
18. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.
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Registered: 2010-04-01 17:54 |
19. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation.
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Registered: 2010-03-21 02:01 |
51 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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