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40 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2020-04-25 19:28 |
1. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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- Development Status : 4 - Beta [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2012-07-03 03:50 |
2. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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- Development Status : 4 - Beta [Filter]
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- Programming Language : C/C\+\+ [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
3. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2011-11-04 17:46 |
4. arm - R functions for processing lm, glm, mer and polr outputs.
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- Topic : Bayesian Statistics [Filter]
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- Topic : Regression Models [Filter]
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Registered: 2008-04-09 23:40 |
5. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory.
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- Topic : Genetics : QTL Mapping [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
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Registered: 2009-10-02 07:07 |
6. Structural equation modeling - Several SEM related packages are developed for conducting structural equation modeling.
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- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2011-09-26 14:13 |
7. rgl: 3D visualization support - rgl development has moved to Github.
rgl is a 3D visualization system based on OpenGL. It provides a medium to high level interface for use in R, currently modelled on classic R graphics, with extensions to allow for interaction.
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- Topic : Graphics : Dynamic Graphics [Filter]
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Registered: 2008-08-16 13:50 |
8. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
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- Topic : Bayesian Statistics [Filter]
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- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
9. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
10. The Soil Texture Wizard - The project has now moved to GitHub: https://github.com/julienmoeys/soiltexture
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- Topic : Environmetrics [Filter]
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Registered: 2010-04-08 12:28 |
11. arules - Mining Association Rules - Infrastructure for representing, manipulating and analyzing transaction data and patterns (frequent itemsets and association rules).
arules is now maintained on Github: https://github.com/mhahsler/arules
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Registered: 2007-05-21 13:55 |
12. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl
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- Topic : Genetics : Phylogenetics [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2011-06-14 14:51 |
13. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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- Programming Language : Fortran [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : High Performance Computing [Filter]
- Topic : Machine Learning [Filter]
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Registered: 2012-08-10 08:48 |
14. lme4 - Mixed-effects models - An R package for fitting and analyzing linear, nonlinear and generalized linear mixed models.
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- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2007-08-17 17:27 |
15. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods
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- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-01-24 12:50 |
16. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).
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- Programming Language : Tcl [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
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Registered: 2011-05-10 20:54 |
17. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis
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Registered: 2014-01-22 14:22 |
18. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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Registered: 2011-04-26 02:20 |
19. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.
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Registered: 2010-01-08 16:59 |
40 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
