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125 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.

Development Status : 5 - Production/Stable [Filter]
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Topic : Bioinformatics : Visualization [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]
Topic : Machine Learning : Bayesian Methods [Filter]

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Registered: 2009-02-18 09:38

1. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl

Development Status : 3 - Alpha [Filter]
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Topic : Genetics : Phylogenetics [Filter]
Topic : Genetics : Population Genetics [Filter]

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Registered: 2011-06-14 14:51

2. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.

Development Status : 5 - Production/Stable [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

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Registered: 2009-02-18 10:01

3. RXKCD - This package allows the visualization of your favorite XKCD comic strip directly from R

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Registered: 2011-07-10 13:54

4. Instrument Limit of Detection Modeling - Limit of Detection (LOD) reflects an (medical diagnostic) instrument's level of sensitivity. We develop the LOD model selection and estimation tools with application to medical diagnostic instruments.

Development Status : 3 - Alpha [Filter]
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Topic : Bioinformatics : Medical Science [Filter]
Topic : Regression Models [Filter]

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Registered: 2011-11-14 17:17

5. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.

Development Status : 3 - Alpha [Filter]
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Topic : Bioinformatics : Medical Science [Filter]

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Registered: 2011-11-04 17:46

6. getMODIS - The "getMODIS" package is not further developed. Please install the "MODIS" package instead!

Development Status : 3 - Alpha [Filter]
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Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
Topic : Time Series [Filter]

Registered: 2011-08-10 11:10

7. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.

Development Status : 4 - Beta [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Genetics : QTL Mapping [Filter]

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Registered: 2009-10-07 19:54

8. Distance Weighted Discrimination (DWD) - Distance Weighted Discrimination (DWD) is a machine learning tool similar to SVM but with better breakdown properties as the number of variables increases in relationship to the number of observations.

Development Status : 4 - Beta [Filter]
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Topic : Machine Learning : Support Vector Machines [Filter]

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Registered: 2011-10-21 13:31

9. The R Games Project - A project devoted to making R more entertaining! Not that it isn't entertaining already but having some built in games would be a good way to kill the time between classes.
Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Operating System : MacOS [Filter] Operating System : Microsoft : Windows [Filter] Operating System : POSIX : Linux [Filter] Programming Language : R (Now Filtering) Topic : Other/Nonlisted Topic [Filter]	Activity Percentile: 0.00 Registered: 2011-06-26 00:24

10. Isolation Forest - This package implements an anomaly detection method that detects data-anomalies using binary trees. Using the property that anomalies are more susceptible to isolation, anomalies can be detected as data points which have short expected path lengths.

Development Status : 3 - Alpha [Filter]
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Topic : Machine Learning : Recursive Partitioning [Filter]

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Registered: 2009-07-14 06:02

11. BaSTA - This package estimates mortality with covariates from capture-recapture/recovery data in a Bayesian framework when many individuals are of unknown age. It includes tools for data checking, model diagnostics and outputs such as life-tables and plots.

Development Status : 3 - Alpha [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Topic : Bayesian Statistics : General Model Fitting [Filter]

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Registered: 2011-07-11 13:52

12. OUwie - Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck (OU) models that allow the strength of selection and drift to vary across selective regimes.

Development Status : 4 - Beta [Filter]
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Topic : Genetics : Phylogenetics [Filter]
Topic : Spatial Data & Statistics : Ecological Analysis [Filter]

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Registered: 2011-07-13 13:38

13. BayesSurv - This package estimates mortality with covariates from capture-recapture/recovery data in a Bayesian framework when many individuals are of unknown age. It includes tools for data checking, model diagnostics and outputs such as life-tables and plots.

Development Status : 3 - Alpha [Filter]
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Topic : Bayesian Statistics : Specific Model Fitting [Filter]

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Registered: 2011-06-08 10:38

14. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.

Development Status : 5 - Production/Stable [Filter]
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Natural Language : German [Filter]
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Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
Topic : Optimization : Mathematical Programming : Linear Programming [Filter]

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Registered: 2007-11-27 09:48

15. factorplot - factorplot provides numerical and graphical summaries of factor-level differences in GLMs. It produces all pairwise hypotheses tests with either the exact pairwise difference and variance or user-supplied quasi-variances or floating absolute risks.

Development Status : 4 - Beta [Filter]
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Topic : Graphics [Filter]
Topic : Regression Models [Filter]
Topic : Social Sciences : Linear and Generalized Linear Models [Filter]

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Registered: 2011-05-30 16:43

16. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes.

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Registered: 2011-06-10 12:24

17. addendum - Utility functions that should have been in R: easy glmnet, pretty graphing and swift debugging and profiling.

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Topic : Machine Learning : Model Selection and Validation [Filter]
Topic : Multivariate Statistics : Missing Data [Filter]
Topic : Regression Models [Filter]

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Registered: 2011-06-17 13:35

18. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.

Development Status : 4 - Beta [Filter]
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Topic : Computational Physics [Filter]
Topic : Connectivity [Filter]
Topic : High Performance Computing : Large Memory [Filter]

Registered: 2009-06-17 16:54

19. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).

Development Status : 5 - Production/Stable [Filter]
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Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
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Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]

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Registered: 2011-05-10 20:54

125 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>