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77 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares.
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- Development Status : 4 - Beta [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2012-07-12 22:01 |
1. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.
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- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Machine Learning : Bayesian Methods [Filter]
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Activity Percentile: 0.00
Registered: 2009-02-18 09:38 |
2. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Genetics [Filter]
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Registered: 2011-03-23 10:20 |
3. cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Time Series [Filter]
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Registered: 2008-12-12 11:07 |
4. Integer and Nonlinear Optimization in R - The project "Integer and Nonlinear Optimization in R (RINO)" provides the packages Rbonmin, Rlago (both interfaces to MINP solvers) and solnp.
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- Development Status : 4 - Beta [Filter]
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Nonlinear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
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Registered: 2008-03-14 14:49 |
5. BradleyTerry2 - BradleyTerry2 provides facilities to specify, fit and evaluate Bradley-Terry models for pairwise comparisons. Models may incorporate object-specific, subject-specific, or contest-specific variables, as well as random effects.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2010-04-28 10:52 |
6. parallelstructure - Package to provide a R framework to make use of multi-core computers when running analysis in the population genetics software STRUCTURE.
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- Development Status : 4 - Beta [Filter]
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- Topic : Genetics : Population Genetics [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2013-03-26 16:28 |
7. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.
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- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2007-11-27 09:48 |
8. speedR - speedR:An R-package for interactive GUI-based data import, filtering and complex ready-to-use code generation to speed up your productivity. speedR recognizes fi le formats like Excel (.xls and .xlsx), open office calc, .csv and .txt fi les automatically.
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- Programming Language : Java [Filter]
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- Topic : Connectivity [Filter]
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- Topic : Software Development : Code Generators [Filter]
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Activity Percentile: 0.00
Registered: 2010-10-29 08:48 |
9. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis
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- Development Status : 5 - Production/Stable [Filter]
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Registered: 2014-01-22 14:22 |
10. rGEDI - rGEDI: NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
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Registered: 2020-03-12 20:57 |
11. foreach - The foreach package provides support for the foreach looping construct. Foreach is an idiom that allows for iterating over elements in a collection, without the use of an explicit loop counter.
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- Development Status : 5 - Production/Stable [Filter]
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Activity Percentile: 0.00
Registered: 2010-11-18 22:18 |
12. Regression Modeling Strategies - Regression modeling, testing, estimation, validation, graphics, prediction, and typesetting by storing enhanced model design attributes in the fit. rms is a collection of 229 functions that assist with and streamline modeling.
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- Development Status : 5 - Production/Stable [Filter]
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- Programming Language : Fortran [Filter]
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Graphics : Applications [Filter]
- Topic : Regression Models [Filter]
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Activity Percentile: 0.00
Registered: 2010-11-22 19:09 |
13. Atlas and Analysis - Atlas and Analysis (A2) of pathways (curated)
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- Development Status : 3 - Alpha [Filter]
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Registered: 2018-01-19 16:21 |
14. netmes - Netmes is an R software package that allows assessing the Gene Regulatory Network Inference (GRNI) algorithms in detail by using several local and global network-based error measures in combination with an ensemble approach.
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Registered: 2013-07-26 14:26 |
15. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects.
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- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2012-05-15 16:23 |
16. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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- Development Status : 4 - Beta [Filter]
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Activity Percentile: 0.00
Registered: 2012-08-10 08:48 |
17. Dave Armstrong's Misc Functions - Package contains functions to aid in the presentation and interpretation of GLMs and related models. These include utilities to help deal with present interactions in linear and logit/probit models, first differences in predicted probabilities, etc...
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- Development Status : 4 - Beta [Filter]
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- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Activity Percentile: 0.00
Registered: 2012-05-07 16:37 |
18. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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Registered: 2012-07-03 03:50 |
19. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods
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- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications [Filter]
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- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-01-24 12:50 |
77 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
