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65 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2012-07-12 22:01 |
1. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-06-23 07:05 |
2. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Programming Language : Perl [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2013-11-21 21:46 |
3. CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM.
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- Development Status : 4 - Beta [Filter]
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- Natural Language : English [Filter]
- Natural Language : French [Filter]
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- Programming Language : C/C\+\+ [Filter]
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- Topic : Econometrics : Linear Regression Models [Filter]
- Topic : Regression Models [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2013-11-14 14:32 |
4. factorplot - factorplot provides numerical and graphical summaries of factor-level differences in GLMs. It produces all pairwise hypotheses tests with either the exact pairwise difference and variance or user-supplied quasi-variances or floating absolute risks.
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- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Topic : Graphics [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2011-05-30 16:43 |
5. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.
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- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Computational Physics [Filter]
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- Topic : High Performance Computing : Large Memory [Filter]
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Registered: 2009-06-17 16:54 |
6. fisheyeR - Fisheye and Hyperbolic-space-alike Interactive Visualization Tools in R.
fisheyeR provides tools for creating Interactive Data Visualizations.
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- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
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- Topic : Graphics : Dynamic Graphics [Filter]
- Topic : Graphics : Plotting [Filter]
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Registered: 2010-01-10 16:39 |
7. Clustericat - This package performs clustering for categorical data-set by the conditional correlated mixture model. It contains a function clusteringcat() performing the clustering on categorical data-set and returns object of appropriate class.
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- Development Status : 4 - Beta [Filter]
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- Natural Language : French [Filter]
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- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification : Cluster Analysis [Filter]
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Registered: 2013-12-05 14:22 |
8. OUwie - Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck (OU) models that allow the strength of selection and drift to vary across selective regimes.
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- Development Status : 4 - Beta [Filter]
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- Topic : Genetics : Phylogenetics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-07-13 13:38 |
9. basisR - This package provides access to the web-services exposed by the BASIS system.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
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- Topic : Bioinformatics : Mathematics [Filter]
- Topic : High Performance Computing : Grid Computing [Filter]
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Registered: 2009-12-15 12:37 |
10. calibayesR - The package also provides a web-serivce interface to the CaliBayes system. See http://www.calibayes.ncl.ac.uk for more details.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : High Performance Computing : Grid Computing [Filter]
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Registered: 2009-11-30 09:36 |
11. Analysis of multi-electrode array data - Functions for the analysis of spike-trains recorded using multi-electrode arrays. Tools include simple visualisation, movie generation, burst analysis, network spikes and episode detection.
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- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2012-04-07 09:14 |
12. Quasi-likelihood parameter estimation - The package provides methods for parameter estimation for statistical models that can be simulated. We follow a quasi-likelihood approach to estimate the unknown parameter by the root of the so-called quasi-score estimating function.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : German [Filter]
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- Programming Language : C/C\+\+ [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Multivariate Statistics [Filter]
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Registered: 2017-08-30 21:22 |
13. Extreme Values in R (evir) - Extreme Value in R: Functions for extreme value theory, which may be divided into the following groups; exploratory data analysis, block maxima, peaks over thresholds (univariate and bivariate), point processes, gev/gpd distributions.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Risk Management [Filter]
- Topic : Time Series [Filter]
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Registered: 2011-03-21 13:20 |
14. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
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Registered: 2008-08-04 05:27 |
15. Animal - The Animal package is intended as tool for analyzing time coded behavioral observation and other ethological data. The project aims to promote the use of R in the the animal sciences and to provide easy to use functions for the researches in the field.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Finance : Data and Date Management [Filter]
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Registered: 2009-03-25 08:04 |
16. KDE & MDS - Helper functions for plotting KDEs and MDS maps of geochronology and geochemistry data, for visualisation of age distributions and sample comparison.
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- Development Status : 4 - Beta [Filter]
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- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2014-03-11 14:23 |
17. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Natural Language : German [Filter]
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- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
18. Species Distribution Modelling tools - THIS PROJECT HAS MOVED to http://rforge.net/SDMTools/ ... Provided will be a set of tools for processing the outcomes of species distribution models.
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- Development Status : 4 - Beta [Filter]
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Registered: 2010-02-17 21:58 |
19. grainscape - Create grains of connectivity and minimum planar graph models to calculate effective distances for landscape connectivity at multiple scales.
**Development of this package has moved to GitHub (https://achubaty.github.io/grainscape).**
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Registered: 2012-03-07 12:18 |
65 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
