Software Map
Project Tree
Now limiting view to projects in the following categories:
Programming Language :: R [Remove This Filter]
Intended Audience :: End Users/Desktop [Remove This Filter]
Natural Language :: English [Remove This Filter]
Development Status :: 4 - Beta [Remove This Filter]
License :: OSI Approved :: GNU General Public License (GPL) [Remove This Filter]
215 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. CHNOSZ - A package for thermodynamic modeling in geochemistry and biochemistry,
with functions for equilibrium activity diagrams and chemical affinities of reactions,
supported by an extensive thermodynamic database and group additivity for proteins. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Chemoinformatics [Filter]
|
Activity Percentile: 78.57
Registered: 2011-05-13 20:48 |
1. lme4 - Mixed-effects models - An R package for fitting and analyzing linear, nonlinear and generalized linear mixed models. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
|
Activity Percentile: 0.00
Registered: 2007-08-17 17:27 |
2. Clustering using convex fusion penalties - An R/C++ implementation of the clusterpath algorithm described in Hocking et al. 2011, for robust convex clustering using sparsity-inducing fusion penalties. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Python [Filter]
- Programming Language : R (Now Filtering)
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
- Topic : Optimization [Filter]
|
Registered: 2011-05-09 12:56 |
3. Analysis of multi-electrode array data - Functions for the analysis of spike-trains recorded using multi-electrode arrays. Tools include simple visualisation, movie generation, burst analysis, network spikes and episode detection. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Medical Science [Filter]
|
Activity Percentile: 0.00
Registered: 2012-04-07 09:14 |
4. metRology - An R package for metrology. metRology provides classes and calculation and plotting functions for metrology applications, including measurement uncertainty estimation and inter-laboratory metrology comparison studies. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-08-06 02:47 |
5. qualV - Qualitative Validation Criteria - Package qualV provides quantitative and qualitative criteria to compare models with data and to measure similarity of patterns. Specific attention is payed to problems with systematic differences and time shifts. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2008-02-28 15:45 |
6. inspectr - Handling and analysis of Vis-NIR spectra, especially for soil science. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Chemoinformatics [Filter]
- Topic : Environmetrics [Filter]
- Topic : Multivariate Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-06-08 03:22 |
7. solaR - Calculation methods of solar radiation and performance of photovoltaic systems from daily and intradaily irradiation data sources. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Computational Physics [Filter]
- Topic : Environmetrics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-24 22:51 |
8. Practical Data Analysis - Support routines and data accompanying Brian Yandell's "Practical Data Analysis for Designed Experiments" (www.stat.wisc.edu/~yandell/pda) book organized as an R package. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2007-07-08 20:21 |
9. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-09-26 05:04 |
10. Continuous Character Transitions - maticce: Mapping Transitions In Continuous Character Evolution
This project provides tools for an information-theoretic approach to estimating the probability of continuous character transitions on phylogenetic trees. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Genetics : Phylogenetics [Filter]
|
Activity Percentile: 0.00
Registered: 2008-11-07 19:39 |
11. partykit: Recursive Partytioning Toolkit - Infrastructure for representing, summarizing, and visualizing tree-structured models. It can be used for constructing or reading tree models from different sources (rpart, RWeka, PMML), sharing
functionality for print/plot/predict methods. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Machine Learning : Recursive Partitioning [Filter]
- Topic : Regression Models [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2008-09-30 11:39 |
12. Classification methods and visualization - Miscellaneous functions for classification and visualization. |
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Machine Learning [Filter]
- Topic : Multivariate Statistics : Supervised Classification and Discriminant Analysis [Filter]
|
Registered: 2007-06-11 10:04 |
13. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2012-07-03 03:50 |
14. colbycol - This is a package intended for reading huge text data files into R by processing columns one by one individually. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : Java [Filter]
- Programming Language : R (Now Filtering)
- Topic : High Performance Computing : Large Memory [Filter]
|
Activity Percentile: 0.00
Registered: 2009-05-18 10:18 |
15. splm: spatial panel data models - A comprehensive toolset for ML and GM estimation and diagnostic testing of econometric models for spatial panel data. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Econometrics [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-06 17:34 |
16. CatDyn Package for Catch Dynamics Models - Statistical models to assess fish stocks are becoming too demanding in terms of biological information. As an alternative to this trend we are developing the CatDyn project, an R package to assess fish stocks by modeling the operation of fishermen at sea. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Optimization [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-05-17 15:37 |
17. smoothtest - This package implements a whole series of smooth tests that serve as goodness of fit tests for univariate data against a whole range of distributions. The tests can be performed both parametric and data driven. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Numerical Analysis : Prob\. Methods, Simulation and Stochastic Differential Equations [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2011-11-29 13:02 |
18. Extreme Values in R (evir) - Extreme Value in R: Functions for extreme value theory, which may be divided into the following groups; exploratory data analysis, block maxima, peaks over thresholds (univariate and bivariate), point processes, gev/gpd distributions. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Risk Management [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-21 13:20 |
19. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Bioinformatics : Visualization [Filter]
|
Activity Percentile: 0.00
Registered: 2012-07-12 22:01 |
215 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>