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129 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Machine Learning : Bayesian Methods [Filter]
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Registered: 2009-02-18 09:38 |
1. Causal Effects Sensitivity Analysis - Graphical Sensitivity Analysis for Assessing Surrogate Endpoints via Causal Inference |
- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2013-02-22 01:18 |
2. Statistical Data Preparation Indicators - During the statistical data preparation process stages of the data are archived (at least raw and the final data). Indicators on missing values, imputations and their impact help to judge the effect of the process and the quality of the final data. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2017-01-21 14:39 |
3. Dave Armstrong's Misc Functions - Package contains functions to aid in the presentation and interpretation of GLMs and related models. These include utilities to help deal with present interactions in linear and logit/probit models, first differences in predicted probabilities, etc... |
- Development Status : 4 - Beta [Filter]
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- Topic : Regression Models [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2012-05-07 16:37 |
4. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Development Status : 3 - Alpha [Filter]
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-04-26 02:20 |
5. IPSUR - This project contains the IPSUR package, the textbook "Introduction to Probability and Statistics Using R", and RcmdrPlugin.IPSUR, an R Commander Plugin to accompany the textbook. IPSUR is distributed under the GNU-FDL. |
- Development Status : 4 - Beta [Filter]
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- Environment : X11 Applications [Filter]
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- Topic : Education : GUI [Filter]
- Topic : Graphical User Interface [Filter]
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Registered: 2007-08-16 17:14 |
6. Demonstrations for teaching and learning - This package is a set of demonstration functions
that can be used in a classroom to demonstrate
statistical concepts, or on your own to better
understand the concepts or the programming. |
- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : Artistic License [Filter]
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Registered: 2009-10-21 20:12 |
7. plantbreeding - plantbreeding: R Software package for analysis and visualization of data from plant breeding and genetics experiments. |
- Development Status : 4 - Beta [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Genetics [Filter]
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Registered: 2012-07-01 21:32 |
8. Integer and Nonlinear Optimization in R - The project "Integer and Nonlinear Optimization in R (RINO)" provides the packages Rbonmin, Rlago (both interfaces to MINP solvers) and solnp. |
- Development Status : 4 - Beta [Filter]
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Nonlinear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
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Registered: 2008-03-14 14:49 |
9. BradleyTerry2 - BradleyTerry2 provides facilities to specify, fit and evaluate Bradley-Terry models for pairwise comparisons. Models may incorporate object-specific, subject-specific, or contest-specific variables, as well as random effects. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
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- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2010-04-28 10:52 |
10. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition. |
- Environment : Console (Text Based) [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
11. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2020-04-25 19:28 |
12. lossDev - A Bayesian time series loss development model. Features include skewed-t distribution with time-varying scale parameter, Reversible Jump MCMC for determining the functional form of the consumption path, and a structural break in this path. |
- Development Status : 4 - Beta [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
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Registered: 2009-10-28 14:53 |
13. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model. |
- Development Status : 4 - Beta [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2012-07-03 03:50 |
14. Easy database interface - Simple database interface for SQLite, MySQL and MS Access. It provides functions for easily reading, writing, listing and subsetting tables in SQLite, MySQL and MS Access. easydb is build on top of RSQLite and RODBC. |
- Development Status : 4 - Beta [Filter]
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- Topic : Database : R Interfaces [Filter]
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Registered: 2011-08-19 09:26 |
15. Robust Horvitz-Thompson Estimation - "rhte": Robust Horvitz-Thompson estimation. The package offers robust methods in order to estimate the mean, total, and ratio (among others) for complex survey samples. |
- Development Status : 4 - Beta [Filter]
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- Topic : Robust Statistics [Filter]
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Registered: 2012-01-12 12:49 |
16. TravelR (Travel Demand Modeling in R) - The TravelR project hosts tools for building travel demand models in R, including highway assignment with useful practical features such as multi-class equilibrium assignment, network turn penalties, select link analysis, and network skims. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2010-04-14 18:34 |
17. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl |
- Development Status : 3 - Alpha [Filter]
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- Topic : Genetics : Phylogenetics [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2011-06-14 14:51 |
18. Eagle for Genome-Wide Association Mappin - The Eagle package is an implementation of multiple-locus association mapping on a genome-wide scale. It can handle inbred or outbred study populations, populations of arbitrary unknown complexity, and data larger than the memory capacity of the computer. |
- Development Status : 1 - Planning [Filter]
- Environment : Web Environment [Filter]
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
- Topic : Genetics : QTL Mapping [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2017-07-24 00:36 |
19. COXMEG - COXMEG provides a tool to fit a Cox mixed-effects model, incorporating fast algorithms for genome-wide association analysis. |
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Registered: 2019-08-02 18:19 |
129 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>