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56 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. modEvA - modEvA is an R package for species distribution model evaluation and analysis.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering) Topic : Spatial Data & Statistics : Ecological Analysis [Filter]	Activity Percentile: 13.33 Registered: 2014-04-04 11:51

1. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
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Programming Language : Perl [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)
Topic : Biostatistics & Medical Statistics [Filter]

Activity Percentile: 0.00

Registered: 2013-11-21 21:46

2. smoothtest - This package implements a whole series of smooth tests that serve as goodness of fit tests for univariate data against a whole range of distributions. The tests can be performed both parametric and data driven.

Development Status : 4 - Beta [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : OS Independent [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)
Topic : Numerical Analysis : Prob\. Methods, Simulation and Stochastic Differential Equations [Filter]
Topic : Other/Nonlisted Topic [Filter]

Activity Percentile: 0.00

Registered: 2011-11-29 13:02

3. netmes - Netmes is an R software package that allows assessing the Gene Regulatory Network Inference (GRNI) algorithms in detail by using several local and global network-based error measures in combination with an ensemble approach.

Intended Audience : End Users/Desktop [Filter]
Intended Audience : Other Audience [Filter]
License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
Natural Language : English [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)

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Registered: 2013-07-26 14:26

4. HaarSeg [MOVED TO GITHUB] - This repository and its package has been moved to <https://github.com/HenrikBengtsson/HaarSeg>

Development Status : 4 - Beta [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)
Topic : Biostatistics & Medical Statistics [Filter]

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Registered: 2009-06-05 00:29

5. SMfSB - R code associated with the second and third editions of the book Stochastic Modelling for Systems Biology, by Darren J Wilkinson, published by Chapman & Hall/CRC Press.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : End Users/Desktop [Filter]
Intended Audience : Other Audience [Filter]
License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
Natural Language : English [Filter]
Operating System : OS Independent [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bayesian Statistics : Specific Model Fitting [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)

Activity Percentile: 0.00

Registered: 2011-02-18 14:08

6. Class Prediction - A suite of packages that can bu used for "class prediction" problems. Includes tools to standardize training-testing regimens and cross-validation schemes.

Development Status : 5 - Production/Stable [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : Artistic License [Filter]
Natural Language : English [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)
Topic : Machine Learning [Filter]
Topic : Multivariate Statistics : Supervised Classification and Discriminant Analysis [Filter]

Activity Percentile: 0.00

Registered: 2014-02-03 16:15

7. CENTIPEDE - CENTIPEDE is a probabilistic framework that integrates tissue-specific experimental data such as histone modifications and DNaseI cleavage patterns with genomic information such as gene annotation and evolutionary conservation.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering)	Activity Percentile: 0.00 Registered: 2010-10-26 14:24

8. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) [Filter]
Environment : X11 Applications [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : OS Independent [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)
Topic : Genetics : Multiple Testing [Filter]
Topic : Multivariate Statistics [Filter]

Activity Percentile: 0.00

Registered: 2010-03-21 02:01

9. RMacoqui - RMacoqui develops a probability procedure for the identification of chorotypes, i.e. distribution patterns shared by a group of species, which can be operatively identified within an area (Baroni-Urbani et al., 1978).

Development Status : 4 - Beta [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Natural Language : Spanish [Filter]
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Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : Fortran [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)
Topic : Cluster Analysis [Filter]
Topic : Spatial Data & Statistics [Filter]

Activity Percentile: 0.00

Registered: 2015-07-04 09:37

10. therese - The purpose of this package is to propose a method for inferring networks from expression data obtained in various experimental condition. The "cLasso" (consensus Lasso) method is implemented.
Development Status : 3 - Alpha [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering) Topic : Regression Models [Filter]	Activity Percentile: 0.00 Registered: 2013-07-05 08:44

11. ParallABEL - ParallABEL aims to speed up the computation of GWA studies and also simplify parallelization in analysis of this important research area. See http://www.sc.psu.ac.th/units/genome/CGBR/ParallABEL/index.html for more details.
Environment : Console (Text Based) [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : POSIX : Linux [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering)	Activity Percentile: 0.00 Registered: 2010-04-23 07:05

12. Peirce - Illustrate Peirces criterion for rejection of outliers from a normal distribution.

Development Status : 4 - Beta [Filter]
Environment : Other Environment [Filter]
Intended Audience : Developers [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
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Topic : Bioinformatics : Statistics (Now Filtering)

Activity Percentile: 0.00

Registered: 2012-09-07 07:56

13. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares.

Development Status : 4 - Beta [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)
Topic : Bioinformatics : Visualization [Filter]

Activity Percentile: 0.00

Registered: 2012-07-12 22:01

14. cvrcalc - A Cardiovascular Risk's Calculator by Scores

Development Status : 5 - Production/Stable [Filter]
Environment : Win32 (MS Windows) [Filter]
Environment : X11 Applications [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Medical Science [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)
Topic : Biostatistics & Medical Statistics [Filter]

Activity Percentile: 0.00

Registered: 2013-08-02 12:18

15. waveTiling - Perform transcriptome analysis from tiling array data by a wavelet-based functional model.
Development Status : 3 - Alpha [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering)	Activity Percentile: 0.00 Registered: 2011-12-05 20:42

16. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
Environment : Console (Text Based) [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : MacOS [Filter] Operating System : POSIX : Linux [Filter] Programming Language : C/C\+\+ [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering) Topic : Genetics [Filter]	Activity Percentile: 0.00 Registered: 2013-12-19 15:12

17. Quantitative Fitness Analysis - QFA is an experimental and computational methodology for estimation of the fitnesses of arrayed microbial cultures growing on solid agar. Methods for estimating fitnesses, fitness variability and genetic interaction strengths are included.

Development Status : 3 - Alpha [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : OS Independent [Filter]
Programming Language : R [Filter]
Topic : Bayesian Statistics : General Model Fitting [Filter]
Topic : Bioinformatics : Mathematics [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)

Activity Percentile: 0.00

Registered: 2010-09-06 17:05

18. Tools for analysis of epigenomic data - Useful functions for quality assessment, visualization, summarization and statistical analysis of epigenomics experiments.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter] Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering) Topic : Bioinformatics : Visualization [Filter]	Activity Percentile: 0.00 Registered: 2010-03-10 09:59

19. Layered and chained mixture models - Layered and chained mixture models for various univariate and multivariate distributions.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics (Now Filtering)
Topic : Multivariate Statistics : Multivariate Distributions [Filter]
Topic : Multivariate Statistics : Unsupervised Classification [Filter]

Activity Percentile: 0.00

Registered: 2011-05-10 07:45

56 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>