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44 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. modEvA - modEvA is an R package for species distribution model evaluation and analysis.
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Activity Percentile: 71.43
Registered: 2014-04-04 11:51 |
1. Range Correlations - Methods from spatial statistics are adapted and implemented to be used for assessing marginal and partial correlations in range and site data (positional data) along genomes based on the Bioconductor package GenomicRanges.
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Registered: 2011-03-07 18:54 |
2. HaarSeg [MOVED TO GITHUB] - This repository and its package has been moved to <https://github.com/HenrikBengtsson/HaarSeg>
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Registered: 2009-06-05 00:29 |
3. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Genetics : Population Genetics [Filter]
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Registered: 2020-04-25 19:28 |
4. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures
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Registered: 2009-04-17 15:10 |
5. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation.
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- Development Status : 3 - Alpha [Filter]
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Registered: 2010-03-21 02:01 |
6. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
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Registered: 2009-02-18 10:01 |
7. GenABEL - A suite of packages for statistical genomics
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Registered: 2009-08-12 17:07 |
8. ORCME - ORCME project develops a package for order restricted clustering of microarray experiments. It reflects on-going research of the bioinformatics group within the Center for Statistics at UHasselt.
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Registered: 2008-08-21 11:49 |
9. EBI Metagenomics - An R package for working with data from the EBI Metagenomics Portal: https://www.ebi.ac.uk/metagenomics/
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Registered: 2016-10-08 19:20 |
10. Evolution simulation and classification - After measuring gene frequencies of modern populations that have a common ancestor, we estimate ancestral allele frequency and selection state for each gene. A bayesian model is used and verified using the included simulator.
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- Programming Language : Fortran [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
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Registered: 2009-07-30 17:27 |
11. Quantitative Fitness Analysis - QFA is an experimental and computational methodology for estimation of the fitnesses of arrayed microbial cultures growing on solid agar. Methods for estimating fitnesses, fitness variability and genetic interaction strengths are included.
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Registered: 2010-09-06 17:05 |
12. plsgenomics: PLS analyses for genomics - This package provides routines for PLS-based genomic analyses. It implements PLS methods for classification with microarray and Next Generation Sequencing data, prediction of transcription factor activities from combined ChIP-chip analysis.
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Registered: 2014-10-30 14:27 |
13. Polyphase - This method accepts the genotype data, the relative physical position of the markers for species of any ploidy and returns the phased output.
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Registered: 2016-02-18 15:57 |
14. RMacoqui - RMacoqui develops a probability procedure for the identification of chorotypes, i.e. distribution patterns shared by a group of species, which can be operatively identified within an area (Baroni-Urbani et al., 1978).
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Registered: 2015-07-04 09:37 |
15. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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Registered: 2009-10-07 19:54 |
16. mixOmics - mixOmics is an R package that supplies different methodologies to unravel relationships between two heterogeneous data sets of size n × p and n × q where the p and q variables are measured on the same samples or individuals n.
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Registered: 2010-06-25 04:17 |
17. Data Analysis Using Regression - R functions for processing lm, glm, and polr outputs. This is a lite version of arm that does not deal with mer class.
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Registered: 2008-07-24 04:32 |
18. IsoGene - Testing for Trend in Dose-Response Microarray Experiments: a Comparison of Testing Procedures, Multiplicity, and Resampling-Based Inference
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Registered: 2007-12-03 15:58 |
19. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties.
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Registered: 2011-10-11 08:51 |
44 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
