Software Map
Project Tree
Now limiting view to projects in the following categories:
Intended Audience :: Developers [Remove This Filter]
Environment :: Console (Text Based) [Remove This Filter]
49 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. zoo: Time Series Infrastructure - An S3 class with methods for totally ordered indexed
observations aimed particularly at irregular
time series. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Basic Time Series Infrastructure [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 100.00
Registered: 2007-01-31 15:02 |
1. R/exams: Automatic Generation of Exams - One-for-all exams generator. Exercises: Single-choice, multiple-choice, arithmetic, string, combinations thereof (cloze). Input formats: LaTeX, Markdown. Output formats: PDF, HTML, Docx, Moodle XML, QTI 1.2, QTI 2.1, Blackboard, OLAT, Ilias, ARSnova, ... |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Connectivity [Filter]
- Topic : Education [Filter]
- Topic : Text [Filter]
|
Activity Percentile: 76.92
Registered: 2012-02-12 00:43 |
2. Convert inline comments to documentation - Generates Rd files from comments in your R code, facilitating sustainable, accurate documentation and rapid package publication. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Software Development : Build Tools [Filter]
- Topic : Software Development : Code Generators [Filter]
- Topic : Text : Documentation [Filter]
|
Registered: 2009-07-29 12:37 |
3. dcr - Data Cloning in R - Data cloning (DC) uses Bayesian MCMC to make maximum likelihood inference of complex hierarchical models. The bundle includes basic infrastructure for DC with parallel computing support, and more specialized packages for ecology. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Optimization [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2009-08-17 16:25 |
4. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-19 22:28 |
5. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : Russian [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-10-20 17:09 |
6. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-01-08 16:59 |
7. Activated Region Fitting - Activated Region Fitting (ARF) is a program for functional Magnetic Resonance Imaging (fMRI) data analysis. ARF uses Gaussian shape spatial models to parameterize active brain regions. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2008-09-18 11:23 |
8. scriptests - Support for using .Rt (transcript) tests
in the tests directory of a package. Provides more
convenience and features than the standard .R/.Rout.save
tests. Tests can be run under R CMD check and also
interactively. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2010-06-19 14:48 |
9. Estimation and Model Checking for GLSM - This package mainly deals with generalized linear spatial models for estimation, model checking and prediction by using MCMC algorithms. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-08-17 10:52 |
10. MeDiChI - R package implementing model based deconvolution of ChIP-chip (transcription factor binding) data, as published in Bioinformatics journal.
Please visit http://baliga.systemsbiology.net/medichi for source code, instructions, and R package downloads. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
|
Registered: 2010-05-14 17:13 |
11. Soil water - The project has now moved to GitHub: https://github.com/julienmoeys/soilwater |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-08-17 21:13 |
12. The Soil Texture Wizard - The project has now moved to GitHub: https://github.com/julienmoeys/soiltexture |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Graphics : Plotting [Filter]
|
Activity Percentile: 0.00
Registered: 2010-04-08 12:28 |
13. Sublogo dendrograms - Sublogo dendrograms are statistical graphics that reveal correlation in biological sequence alignments. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : Web Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : PHP [Filter]
- Programming Language : R [Filter]
- Programming Language : Unix Shell [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
- Topic : Graphics : Plotting [Filter]
|
Registered: 2009-06-19 09:14 |
14. unit and system testing for R - rtest was a fork from RUnit. the author started it because he needed Hudson/Jenkins output from R and he did not manage to contact the developers of RUnit.
Status: unmantained.
Alternative: svUnit (SciVews). |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : Web Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-21 08:01 |
15. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : BSD License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : Multivariate Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-02-02 00:51 |
16. Circular Statistics - This is the circular package build over the R port of the CircStats package by Ulric Lund from 'Topics in circular Statistics' (2001) S. Rao Jammalamadaka and A. SenGupta, World Scientific. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2007-11-06 22:41 |
17. AICTS II - VAR, SVAR, VECM and SVECM models: Estimation, prediction, impulse response analysis, forecast error variance decomposition, diagnostic testing. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2007-08-23 15:35 |
18. AICTS I - Unit root and cointegration tests encountered in applied econometric analysis. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2007-08-23 15:29 |
19. related - Genetic relatedness in R - An R package that allows users to estimate pairwise relatedness of individuals based on codominant molecular markers, and also has simulation functions for comparing the performance of different estimators and for testing the resolution of a data set. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : Public Domain [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : Population Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2014-04-09 08:33 |
49 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>