Software Map
Project Tree
Now limiting view to projects in the following categories:
Intended Audience :: Developers [Remove This Filter]
Environment :: Console (Text Based) [Remove This Filter]
Development Status :: 4 - Beta [Remove This Filter]
Programming Language :: R [Remove This Filter]
41 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2011-06-23 07:05 |
1. HAB bathymetry models - R implementation of the remote sensing based Hydraulically Assisted Bathymetry models (HAB) developed by Fonstad, M. & Marcus, W. (2005). Functions are provided for modelling with a range of custom variables. Summary functions are provided as well. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2009-05-08 10:01 |
2. memisc |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Graphics [Filter]
- Topic : Social Sciences [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2013-02-08 10:55 |
3. candlesticks - candlesticks: filter Japanese Candlestick Patterns like Doji, Engulfing, Harami, etc. out of OHLC price data. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Econometrics [Filter]
- Topic : Finance [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2012-01-06 14:40 |
4. TradeAnalytics - Transaction-oriented infrastructure for defining instruments, transactions, portfolios and accounts for trading systems and strategy simulation. Provides portfolio support for multi-asset class and multi-currency portfolios. Still in heavy development. |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Finance : Data and Date Management [Filter]
- Topic : Finance : Time Series [Filter]
|
Registered: 2008-12-09 03:28 |
5. Conditional Random Fields - This project provides a set of tools for conditional random fields tasks such as decoding/inference/sampling/training. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Graphical Models [Filter]
- Topic : Machine Learning [Filter]
|
Activity Percentile: 0.00
Registered: 2010-12-28 07:13 |
6. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2012-03-28 07:52 |
7. delftfews - delftfews is a timeseries library extending zoo. it aims at offering a usable base of functions for handling sets of time series in a water management framework. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Environmetrics [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2010-05-11 12:39 |
8. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-09-26 05:04 |
9. blupsurv - Tools for fitting proportional hazards models to clustered
recurrent events data. Nested frailties are modeled by their
best linear unbiased predictors under an auxiliary Poisson model.
Univariate and bivariate recurrent events processes are permitted. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2008-06-14 13:52 |
10. splinesurv - A package containing utilities for nonparametric Bayesian analysis of clustered survival data. The baseline hazard function and frailty density are modeled using penalized B-splines. Regression and spline parameters are estimated via MCMC. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Other/Nonlisted Topic [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2008-01-08 16:50 |
11. spatial copula - This package has moved to: https://github.com/bengraeler/spcopula |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions : Copulae [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-21 17:39 |
12. Markov decision processes (MDPs) in R - Create and optimize MDPs with discrete time steps and state space. Both normal MDPs and hierarchical MDPs can be considered. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Optimization [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2009-06-08 12:06 |
13. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-11 08:51 |
14. aroma.* packages [MOVED TO GITHUB] - This repository and all of its packages have been moved to https://github.com/HenrikBengtsson/ |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : No Input/Output (Daemon) [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- License : Other/Proprietary License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Database [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-05-19 20:01 |
15. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD. |
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : Other/Proprietary License [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Computational Physics [Filter]
- Topic : Connectivity [Filter]
- Topic : High Performance Computing : Large Memory [Filter]
|
Registered: 2009-06-17 16:54 |
16. RpepXML - R pepXML is an R interface to the pepXML standard for MSMS data identification. It allows pepXML files to be imported into R and for easy manipulation and filtering. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Environment : Other Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : Artistic License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-03 21:34 |
17. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Computational Physics [Filter]
|
Activity Percentile: 0.00
Registered: 2014-06-28 12:14 |
18. Harmony - This package is a natural language processing (NLP) library that allows users to access large language models and use them to compare datasets where variable names are in unstructured text form. The target users are often academic researchers in the social sciences, such as psychology/mental health. We are actively recruiting contributors. We have an existing Python library also.
The source code is at: https://github.com/harmonydata/harmony_r
The web front-end of the tool is at: https://harmonydata.ac.uk/
What does Harmony do?
* Psychologists and social scientists often have to match items in different questionnaires, such as "I often feel anxious" and "Feeling nervous, anxious or afraid".
* This is called harmonisation.
* Harmonisation is a time consuming and subjective process.
* Going through long PDFs of questionnaires and putting the questions into Excel is no fun.
* Enter Harmony, a tool that uses natural language processing and generative AI models to help researchers harmonise questionnaire items, even in different languages. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Social Sciences [Filter]
- Topic : Text : Text Mining [Filter]
|
Activity Percentile: 0.00
Registered: 2025-02-13 10:40 |
19. linprog: Linear Programming/Optimization - This package can be used to solve Linear Programming / Linear optimization problems by using the simplex algorithm. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
|
Activity Percentile: 0.00
Registered: 2009-12-25 16:29 |
41 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>