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Topic > Bioinformatics

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9 projects in result set.

0. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.

Development Status : 4 - Beta [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics [Filter]

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Registered: 2014-11-28 09:55

1. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) [Filter]
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Programming Language : Fortran [Filter]
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Topic : Bioinformatics [Filter]
Topic : High Performance Computing [Filter]
Topic : Machine Learning [Filter]

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Registered: 2012-08-10 08:48

2. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis

Development Status : 5 - Production/Stable [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics [Filter]
Topic : Datasets [Filter]

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Registered: 2014-01-22 14:22

3. dcGOR - dcGOR is a package for analysing domain-centric ontologies and annotations. It includes: enrichment analysis and visualisation; construction of a domain (semantic similarity) network; significance analysis for a contact network.

Development Status : 6 - Mature [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics [Filter]
Topic : Database [Filter]

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Registered: 2014-10-23 15:21

4. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp

Development Status : 4 - Beta [Filter]
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Natural Language : German [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics [Filter]
Topic : Genetics [Filter]
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Registered: 2013-05-29 18:34

5. RHRV - Package for carrying out heart rate variability studies of ECG records

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Programming Language : R [Filter]
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Registered: 2010-10-14 10:22

6. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.

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Programming Language : R [Filter]
Topic : Bioinformatics [Filter]
Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]

Registered: 2013-01-21 21:13

7. Priority Index - Priority Index or PI accelerates target selection through networking genetic evidence.

Development Status : 3 - Alpha [Filter]
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Programming Language : R [Filter]
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Registered: 2016-04-21 23:06

8. XGR - eXploring Genomic Relations (XGR) at the gene and SNP level through enrichment analysis, similarity analysis and network analysis

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Registered: 2016-04-01 13:46