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39 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. seriation - Infrastructure for seriation - Infrastructure for seriation with an implementation of several seriation/sequencing techniques to reorder matrices, dissimilarity matrices, and dendrograms. Seriation is now maintained on githup at http://github.com/mhahsler/seriation

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Registered: 2008-02-01 22:32

1. mixOmics - mixOmics is an R package that supplies different methodologies to unravel relationships between two heterogeneous data sets of size n × p and n × q where the p and q variables are measured on the same samples or individuals n.

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Registered: 2010-06-25 04:17

2. ZooImage - ZooImage is a software (based on R and ImageJ) to analyze plankton samples, using image analysis and machine learning techniques. This is the old repository, please, look at https://github.com/SciViews/zooimage for latest version!

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Registered: 2009-02-18 14:57

3. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis

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Registered: 2014-01-22 14:22

4. qsaR in R - This project aims at building a flexible framework for working with QSAR in R.

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Registered: 2012-10-22 23:24

5. rgl: 3D visualization support - rgl development has moved to Github. rgl is a 3D visualization system based on OpenGL. It provides a medium to high level interface for use in R, currently modelled on classic R graphics, with extensions to allow for interaction.

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Registered: 2008-08-16 13:50

6. addendum - Utility functions that should have been in R: easy glmnet, pretty graphing and swift debugging and profiling.

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Registered: 2011-06-17 13:35

7. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package.

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Registered: 2010-11-19 22:28

8. CNVScope - CNVScope: Visually exploring copy number aberrations in cancer genomes

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Registered: 2019-07-16 15:34

9. Classification and Regression Training - The caret packages contain functions for tuning predictive models, pre-processing, variable importance and other tools related to machine learning and pattern recognition. Parallel processing versions of the main package are also included.

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Registered: 2008-06-05 19:31

10. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.

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Registered: 2010-01-08 16:59

11. Soil water - The project has now moved to GitHub: https://github.com/julienmoeys/soilwater

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Registered: 2010-08-17 21:13

12. speedR - speedR:An R-package for interactive GUI-based data import, filtering and complex ready-to-use code generation to speed up your productivity. speedR recognizes file formats like Excel (.xls and .xlsx), open office calc, .csv and .txt files automatically.

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Registered: 2010-10-29 08:48

13. Modelling Peaks Over Threshold - The project consists in developing functions for peaks over threshold modeling. Most of results come from the extreme value theory (EVT). The EVT is currently extensively used, mostly in environmental sciences and finance.

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Registered: 2007-09-21 14:29

14. The Soil Texture Wizard - The project has now moved to GitHub: https://github.com/julienmoeys/soiltexture

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Registered: 2010-04-08 12:28

15. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data.

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Registered: 2010-10-20 17:09

16. R package nlstools - The R package nlstools: a toolbox for nonlinear regression diagnostics

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Registered: 2009-02-24 11:54

17. Optimal Two-stage Phase II Design - This R package creates the optimal two-stage phase II designs with long-term endpoint. A later expanded version of the package (OptInterim) can be downloaded on CRAN http://cran.r-project.org/web/packages/OptInterim/index.html

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Registered: 2008-12-14 01:13

18. arules - Mining Association Rules - Infrastructure for representing, manipulating and analyzing transaction data and patterns (frequent itemsets and association rules). arules is now maintained on Github: https://github.com/mhahsler/arules

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Registered: 2007-05-21 13:55

19. Sublogo dendrograms - Sublogo dendrograms are statistical graphics that reveal correlation in biological sequence alignments.

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Registered: 2009-06-19 09:14

39 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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