Software Map
Project Tree
Now limiting view to projects in the following categories:
Intended Audience :: Developers [Remove This Filter]
Intended Audience :: End Users/Desktop [Remove This Filter]
Environment :: Console (Text Based) [Remove This Filter]
133 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. waveslim: Wavelet methods for 1/2/3D - Basic wavelet routines for the processing/analysis/inference of time series, images and 3D arrays. The code provided here is based on Percival and Walden (2000); Gencay, Selcuk and Whitcher (2001); Kingsbury (1999); and Selesnick (200?). |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics [Filter]
- Topic : Finance [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-26 17:20 |
1. Automated Exercise Generator - The goal is to allow teacher to generate sets of exercises with answers. Exercise template contains a text description, dataset generator (will be included into the text description) and a step-by-step answer with results calculated on the generated data. |
- Development Status : 1 - Planning [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Education [Filter]
|
Activity Percentile: 0.00
Registered: 2008-09-16 18:15 |
2. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods |
- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Registered: 2011-01-24 12:50 |
3. Structure-Time Diagram - The STdiag package is designed to provide efficient tools to simply plot a structure-time diagram to represent dynamics of a structured time series. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Graphics : Plotting [Filter]
|
Activity Percentile: 0.00
Registered: 2012-10-25 13:03 |
4. spatial copula - This package has moved to: https://github.com/bengraeler/spcopula |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions : Copulae [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-21 17:39 |
5. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : Russian [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-10-20 17:09 |
6. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Genetics [Filter]
- Topic : Graphical Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-01-07 17:53 |
7. memisc |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Graphics [Filter]
- Topic : Social Sciences [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2013-02-08 10:55 |
8. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : High Performance Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2013-05-29 18:34 |
9. Harmony - This package is a natural language processing (NLP) library that allows users to access large language models and use them to compare datasets where variable names are in unstructured text form. The target users are often academic researchers in the social sciences, such as psychology/mental health. We are actively recruiting contributors. We have an existing Python library also.
The source code is at: https://github.com/harmonydata/harmony_r
The web front-end of the tool is at: https://harmonydata.ac.uk/
What does Harmony do?
* Psychologists and social scientists often have to match items in different questionnaires, such as "I often feel anxious" and "Feeling nervous, anxious or afraid".
* This is called harmonisation.
* Harmonisation is a time consuming and subjective process.
* Going through long PDFs of questionnaires and putting the questions into Excel is no fun.
* Enter Harmony, a tool that uses natural language processing and generative AI models to help researchers harmonise questionnaire items, even in different languages. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Social Sciences [Filter]
- Topic : Text : Text Mining [Filter]
|
Activity Percentile: 0.00
Registered: 2025-02-13 10:40 |
10. bootBCa - Function BCa finds confidence intervals using Efron's nonparametric bias-corrected and accelerated (BCa) bootstrap method. It supports adaptive determination of the number of bootstrap replications and requires less memory than other implementations. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : BSD License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Robust Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2014-07-22 16:16 |
11. Breaks For Additive Season and Trend - BFAST, Breaks For Additive Season and Trend, integrates the decomposition of time series into trend, season, and remainder components with methods for detecting and characterizing change within time series. |
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Structural Change [Filter]
- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2009-09-14 03:28 |
12. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : Other/Proprietary License [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Computational Physics [Filter]
- Topic : Connectivity [Filter]
- Topic : High Performance Computing : Large Memory [Filter]
|
Registered: 2009-06-17 16:54 |
13. ctv: CRAN Task Views - Hosting of the project has moved to https://codeberg.org/zeileis/ctv |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2007-06-08 16:40 |
14. Layered and chained mixture models - Layered and chained mixture models for various univariate and multivariate distributions. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification [Filter]
|
Activity Percentile: 0.00
Registered: 2011-05-10 07:45 |
15. Parallel computations in R - This package uses and extends parallel infrastructure available in R and provides various applications in HPC. |
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
|
Activity Percentile: 0.00
Registered: 2007-01-28 18:20 |
16. lsmeans - Calculate adjusted means and standard errors for main factors and interaction terms of lm, gls, lme and lme4 models. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : Public Domain [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows : Windows NT/2000/XP [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Genetics : Multiple Testing [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
|
Activity Percentile: 0.00
Registered: 2009-09-10 11:49 |
17. rmodest - Rmodest is a package that will allow you to easily fit mortality functions to your survival data, and to test hypotheses about your data. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : OS Independent [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2008-04-24 04:24 |
18. RpepXML - R pepXML is an R interface to the pepXML standard for MSMS data identification. It allows pepXML files to be imported into R and for easy manipulation and filtering. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : Other Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : Artistic License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-03 21:34 |
19. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-01-08 16:59 |
133 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>