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0. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations
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Registered: 2011-02-02 00:51 |
1. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis.
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Registered: 2011-09-26 05:04 |
2. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.
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Registered: 2009-06-17 16:54 |
3. trip -- animal tracking data - The development of trip package is now hosted on GitHub,
https://github.com/mdsumner/trip
MDSumner 2013-07-04
Location estimation, track and spatial analysis for animal tag data.
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Registered: 2010-06-24 02:07 |
4. DICOM: Import DICOM data via R - The DICOM package is a small collection of R functions to import binary data files (e.g., MRI, CT, PET, etc.) that conform to the DICOM Data Standard.
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Registered: 2009-05-29 21:29 |
5. HAB bathymetry models - R implementation of the remote sensing based Hydraulically Assisted Bathymetry models (HAB) developed by Fonstad, M. & Marcus, W. (2005). Functions are provided for modelling with a range of custom variables. Summary functions are provided as well.
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Registered: 2009-05-08 10:01 |
6. aroma.* packages [MOVED TO GITHUB] - This repository and all of its packages have been moved to https://github.com/HenrikBengtsson/
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Registered: 2009-05-19 20:01 |
7. MEET.5.1:Motif Element Estimation Tools - MEET 5.1 is an R-package that includes a set of models, aprox. 550, and tools for the detection of cis-regulatory sequences.
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Registered: 2011-08-10 14:27 |
8. blupsurv - Tools for fitting proportional hazards models to clustered
recurrent events data. Nested frailties are modeled by their
best linear unbiased predictors under an auxiliary Poisson model.
Univariate and bivariate recurrent events processes are permitted.
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Registered: 2008-06-14 13:52 |
9. splinesurv - A package containing utilities for nonparametric Bayesian analysis of clustered survival data. The baseline hazard function and frailty density are modeled using penalized B-splines. Regression and spline parameters are estimated via MCMC.
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Registered: 2008-01-08 16:50 |
10. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
11. Statistical methods for visual fields - a collection of tools for analyzing the field of vision. It provides a framework for development and use of innovative methods for visualisation, statistical analysis, and clinical interpretation of visual field loss and its change over time
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Registered: 2011-10-14 00:24 |
12. Probability - This package is for performing elementary probability on finite sample spaces, represented by data frames or lists. Functionality includes setting up sample spaces, set algebra, probability and conditional probability, characteristic functions, and more.
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Registered: 2008-01-09 17:16 |
13. spatial copula - This package has moved to: https://github.com/bengraeler/spcopula
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- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions : Copulae [Filter]
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Registered: 2011-03-21 17:39 |
14. memisc
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Registered: 2013-02-08 10:55 |
15. logisticDx - Diagnostic tests for logistic regression. Includes 15x common diagnostic tests including leverage, dChi-square and dBhat per covariate pattern. Also plots for same.
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Registered: 2012-09-10 02:59 |
16. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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Registered: 2012-08-10 08:48 |
17. Analysis of Count Time Series - R package which provides likelihood-based methods for model fitting and assessment, prediction and intervention analysis of count time series following generalized linear models.
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- Topic : Econometrics : Structural Change [Filter]
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Registered: 2013-04-04 13:48 |
18. ordijuice - ordijuice is package for unconstrained ordination of vegetation data, running under JUICE software (http://www.sci.muni.cz/botany/juice/). Generally a wrapper for functions from package vegan, with some additional functions.
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Registered: 2009-02-18 08:49 |
19. Species Distribution Modelling - sdm is an extendable framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time.
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Registered: 2014-05-26 16:09 |
42 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
