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171 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
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Programming Language : Perl [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Biostatistics & Medical Statistics [Filter]

Activity Percentile: 0.00

Registered: 2013-11-21 21:46

1. BradleyTerry2 - BradleyTerry2 provides facilities to specify, fit and evaluate Bradley-Terry models for pairwise comparisons. Models may incorporate object-specific, subject-specific, or contest-specific variables, as well as random effects.

Development Status : 5 - Production/Stable [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Programming Language : R [Filter]
Topic : Regression Models [Filter]
Topic : Social Sciences : Linear and Generalized Linear Models [Filter]

Activity Percentile: 0.00

Registered: 2010-04-28 10:52

2. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.

Development Status : 2 - Pre-Alpha [Filter]
Environment : Console (Text Based) [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
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Programming Language : Other [Filter]
Programming Language : R [Filter]
Topic : High Performance Computing : Parallel Computing [Filter]

Activity Percentile: 0.00

Registered: 2011-06-10 12:13

3. CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM.

Development Status : 4 - Beta [Filter]
Intended Audience : Developers [Filter]
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Natural Language : English (Now Filtering)
Natural Language : French [Filter]
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Programming Language : R [Filter]
Topic : Econometrics : Linear Regression Models [Filter]
Topic : Regression Models [Filter]
Topic : Robust Statistics [Filter]

Activity Percentile: 0.00

Registered: 2013-11-14 14:32

4. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
Environment : Console (Text Based) [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Operating System : MacOS [Filter] Operating System : POSIX : Linux [Filter] Programming Language : C/C\+\+ [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter] Topic : Genetics [Filter]	Activity Percentile: 0.00 Registered: 2013-12-19 15:12

5. seriation - Infrastructure for seriation - Infrastructure for seriation with an implementation of several seriation/sequencing techniques to reorder matrices, dissimilarity matrices, and dendrograms. Seriation is now maintained on githup at http://github.com/mhahsler/seriation

Development Status : 5 - Production/Stable [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Programming Language : C/C\+\+ [Filter]
Programming Language : Fortran [Filter]
Programming Language : R [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
Topic : Optimization : Mathematical Programming : Global Optimization [Filter]

Registered: 2008-02-01 22:32

6. factorplot - factorplot provides numerical and graphical summaries of factor-level differences in GLMs. It produces all pairwise hypotheses tests with either the exact pairwise difference and variance or user-supplied quasi-variances or floating absolute risks.

Development Status : 4 - Beta [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Programming Language : R [Filter]
Topic : Graphics [Filter]
Topic : Regression Models [Filter]
Topic : Social Sciences : Linear and Generalized Linear Models [Filter]

Activity Percentile: 0.00

Registered: 2011-05-30 16:43

7. TSP - Traveling Salesperson Problem - Basic infrastructure and some algorithms for the traveling salesperson problem (TSP). The package is now maintained on github at http://github.com/mhahsler/TSP

Development Status : 5 - Production/Stable [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Optimization : Mathematical Programming : Global Optimization [Filter]

Registered: 2007-02-20 12:47

8. data management R Tools - The "dmRTools" package is collection of functions can be used in a clinical trials data management system.

Development Status : 5 - Production/Stable [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Operating System : POSIX : SunOS/Solaris [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Medical Science [Filter]
Topic : Bioinformatics : Visualization [Filter]

Activity Percentile: 0.00

Registered: 2011-10-10 21:38

9. causality - My project is to create packages r to analyze the causal effects, because it is very important to study the relations among the variables for understanding the mechanisms that underlie the various phenomena.

Development Status : 1 - Planning [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
Natural Language : French [Filter]
Operating System : MacOS [Filter]
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Programming Language : R [Filter]
Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
Topic : Social Sciences : Other Regression Models [Filter]

Activity Percentile: 0.00

Registered: 2015-03-12 19:52

10. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) [Filter]
Environment : X11 Applications [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Graphical Models [Filter]
Topic : Time Series [Filter]

Activity Percentile: 0.00

Registered: 2011-06-10 12:24

11. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects.

Development Status : 4 - Beta [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Regression Models [Filter]
Topic : Robust Statistics [Filter]

Activity Percentile: 0.00

Registered: 2012-05-15 16:23

12. SPRINT: Simple Parallel R INTerface - SPRINT is a Simple Parallel R INTerface to High Performance Computing (HPC) that enables biologists to run statistical analysis scripts using R in parallel on HPC clusters. It consists of an HPC harness and a library of parallelized R functions.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
Operating System : POSIX : Linux [Filter]
Programming Language : C/C\+\+ [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : High Performance Computing : Parallel Computing [Filter]

Activity Percentile: 0.00

Registered: 2009-11-20 16:56

13. COXMEG - COXMEG provides a tool to fit a Cox mixed-effects model, incorporating fast algorithms for genome-wide association analysis.
Development Status : 3 - Alpha [Filter] Intended Audience : Developers [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Operating System : Microsoft : Windows [Filter] Operating System : POSIX : Linux [Filter] Programming Language : C/C\+\+ [Filter] Programming Language : R [Filter] Topic : Bioinformatics [Filter]	Activity Percentile: 0.00 Registered: 2019-08-02 18:19

14. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]

Activity Percentile: 0.00

Registered: 2015-02-12 00:09

15. RHRV - Package for carrying out heart rate variability studies of ECG records

Development Status : 6 - Mature [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics [Filter]

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Registered: 2010-10-14 10:22

16. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).

Development Status : 5 - Production/Stable [Filter]
Environment : Other Environment [Filter]
Environment : Win32 (MS Windows) [Filter]
Environment : X11 Applications [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
License : Public Domain [Filter]
Natural Language : English (Now Filtering)
Natural Language : Spanish [Filter]
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Programming Language : R [Filter]
Programming Language : Tcl [Filter]
Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
Topic : Design of Experiments & Analysis of Experimental Data [Filter]
Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]

Activity Percentile: 0.00

Registered: 2011-05-10 20:54

17. Species Distribution Modelling tools - THIS PROJECT HAS MOVED to http://rforge.net/SDMTools/ ... Provided will be a set of tools for processing the outcomes of species distribution models.

Development Status : 4 - Beta [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
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Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Spatial Data & Statistics : Ecological Analysis [Filter]

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Registered: 2010-02-17 21:58

18. CNVScope - CNVScope: Visually exploring copy number aberrations in cancer genomes

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) [Filter]
Environment : Web Environment [Filter]
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License : OSI Approved : BSD License [Filter]
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Operating System : Microsoft : Windows : Windows NT/2000/XP [Filter]
Operating System : Other OS [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics : Visualization [Filter]
Topic : Genetics [Filter]
Topic : High Performance Computing [Filter]

Activity Percentile: 0.00

Registered: 2019-07-16 15:34

19. Extremal processes - Modelling and Analysis of Extremal Processes

Development Status : 3 - Alpha [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
Operating System : MacOS [Filter]
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Programming Language : R [Filter]
Topic : Environmetrics [Filter]
Topic : Multivariate Statistics [Filter]
Topic : Spatial Data & Statistics [Filter]

Activity Percentile: 0.00

Registered: 2010-01-28 09:50

171 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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