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Topic > Bioinformatics

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13 projects in result set.

0. RHRV - Package for carrying out heart rate variability studies of ECG records

Development Status : 6 - Mature [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2010-10-14 10:22

1. Atlas and Analysis - Atlas and Analysis (A2) of pathways (curated)

Development Status : 3 - Alpha [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2018-01-19 16:21

2. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.

Development Status : 4 - Beta [Filter]
Intended Audience : Developers [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2014-11-28 09:55

3. Priority Index - Priority Index or PI accelerates target selection through networking genetic evidence.

Development Status : 3 - Alpha [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Topic : Bioinformatics (Now Filtering)
Topic : Genetics [Filter]
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Registered: 2016-04-21 23:06

4. dcGOR - dcGOR is a package for analysing domain-centric ontologies and annotations. It includes: enrichment analysis and visualisation; construction of a domain (semantic similarity) network; significance analysis for a contact network.

Development Status : 6 - Mature [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Topic : Database [Filter]

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Registered: 2014-10-23 15:21

5. XGR - eXploring Genomic Relations (XGR) at the gene and SNP level through enrichment analysis, similarity analysis and network analysis

Development Status : 5 - Production/Stable [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2016-04-01 13:46

6. COXMEG - COXMEG provides a tool to fit a Cox mixed-effects model, incorporating fast algorithms for genome-wide association analysis.

Development Status : 3 - Alpha [Filter]
Intended Audience : Developers [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2019-08-02 18:19

7. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Natural Language : German [Filter]
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Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
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Topic : High Performance Computing [Filter]

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Registered: 2013-05-29 18:34

8. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.

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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Topic : Bioinformatics (Now Filtering)
Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]

Registered: 2013-01-21 21:13

9. Model-Free Psychometric Functions - Local linear estimation of psychometric functions. Provides functions for nonparametric estimation of a psychometric function and for estimation of a derived threshold and slope, and their standard deviations and confidence intervals.

Development Status : 5 - Production/Stable [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
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Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
Topic : Regression Models [Filter]

Activity Percentile: 0.00

Registered: 2009-08-22 09:52

10. RNetLogo (Discontinued) - RNetLogo is an interface to the agent-based modelling plattform NetLogo. NL can be embedded into the R environment with headless (no GUI) and interactive GUI mode. It provides functions to load models, execute commands and to get values from reporters.

Development Status : 5 - Production/Stable [Filter]
Intended Audience : Developers [Filter]
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Intended Audience : Other Audience [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
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Operating System : POSIX : Linux [Filter]
Programming Language : Java [Filter]
Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
Topic : Genetics [Filter]
Topic : Social Sciences [Filter]

Activity Percentile: 0.00

Registered: 2011-08-19 15:59

11. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
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Programming Language : Fortran [Filter]
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Topic : Bioinformatics (Now Filtering)
Topic : High Performance Computing [Filter]
Topic : Machine Learning [Filter]

Activity Percentile: 0.00

Registered: 2012-08-10 08:48

12. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis

Development Status : 5 - Production/Stable [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
Operating System : MacOS [Filter]
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Operating System : POSIX : Linux [Filter]
Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
Topic : Datasets [Filter]

Activity Percentile: 0.00

Registered: 2014-01-22 14:22