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43 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
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- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2011-05-10 20:54 |
1. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Development Status : 3 - Alpha [Filter]
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-04-26 02:20 |
2. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl
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- Topic : Genetics : Phylogenetics [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2011-06-14 14:51 |
3. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
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Registered: 2010-01-08 16:59 |
4. The Soil Texture Wizard - The project has now moved to GitHub: https://github.com/julienmoeys/soiltexture
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- Topic : Environmetrics [Filter]
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Registered: 2010-04-08 12:28 |
5. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
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- Development Status : 4 - Beta [Filter]
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- Programming Language : C/C\+\+ [Filter]
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- Topic : Bayesian Statistics [Filter]
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- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
6. Structural equation modeling - Several SEM related packages are developed for conducting structural equation modeling.
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- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2011-09-26 14:13 |
7. foreach - The foreach package provides support for the foreach looping construct. Foreach is an idiom that allows for iterating over elements in a collection, without the use of an explicit loop counter.
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- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2010-11-18 22:18 |
8. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2011-11-04 17:46 |
9. general multiple-table data management - Our objective is to develop classes of objects that (1) make handling multiple-table data sets easier and (2) seamlessly integrate with existing R plotting and model-fitting functions; our philosophy is to keep data management and data analysis separate.
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- Development Status : 4 - Beta [Filter]
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- Topic : Environmetrics [Filter]
- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data : Data Preprocessing [Filter]
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Registered: 2011-07-27 02:07 |
10. speedR - speedR:An R-package for interactive GUI-based data import, filtering and complex ready-to-use code generation to speed up your productivity. speedR recognizes fi le formats like Excel (.xls and .xlsx), open office calc, .csv and .txt fi les automatically.
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- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
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- Programming Language : Java [Filter]
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- Topic : Connectivity [Filter]
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- Topic : Software Development : Code Generators [Filter]
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Registered: 2010-10-29 08:48 |
11. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package.
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Registered: 2010-11-19 22:28 |
12. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects.
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- Development Status : 4 - Beta [Filter]
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- Topic : Regression Models [Filter]
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Registered: 2012-05-15 16:23 |
13. BradleyTerry2 - BradleyTerry2 provides facilities to specify, fit and evaluate Bradley-Terry models for pairwise comparisons. Models may incorporate object-specific, subject-specific, or contest-specific variables, as well as random effects.
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- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2010-04-28 10:52 |
14. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2012-07-03 03:50 |
15. seriation - Infrastructure for seriation - Infrastructure for seriation with an implementation of several seriation/sequencing techniques to reorder matrices, dissimilarity matrices, and dendrograms. Seriation is now maintained on githup at http://github.com/mhahsler/seriation
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- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
- Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
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Registered: 2008-02-01 22:32 |
16. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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- Development Status : 4 - Beta [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
17. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.
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- Topic : Bioinformatics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
18. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory.
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- Programming Language : R [Filter]
- Topic : Genetics : QTL Mapping [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
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Registered: 2009-10-02 07:07 |
19. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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Registered: 2012-08-10 08:48 |
43 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
