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Topic > Bioinformatics

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11 projects in result set.

0. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.

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Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]

Registered: 2013-01-21 21:13

1. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.

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Registered: 2012-08-10 08:48

2. RNetLogo (Discontinued) - RNetLogo is an interface to the agent-based modelling plattform NetLogo. NL can be embedded into the R environment with headless (no GUI) and interactive GUI mode. It provides functions to load models, execute commands and to get values from reporters.

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Registered: 2011-08-19 15:59

3. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis

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Registered: 2014-01-22 14:22

4. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp

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Registered: 2013-05-29 18:34

5. dcGOR - dcGOR is a package for analysing domain-centric ontologies and annotations. It includes: enrichment analysis and visualisation; construction of a domain (semantic similarity) network; significance analysis for a contact network.

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Registered: 2014-10-23 15:21

6. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.

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Registered: 2014-11-28 09:55

7. RHRV - Package for carrying out heart rate variability studies of ECG records

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Registered: 2010-10-14 10:22

8. Priority Index - Priority Index or PI accelerates target selection through networking genetic evidence.

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Registered: 2016-04-21 23:06

9. XGR - eXploring Genomic Relations (XGR) at the gene and SNP level through enrichment analysis, similarity analysis and network analysis

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Registered: 2016-04-01 13:46

10. COXMEG - COXMEG provides a tool to fit a Cox mixed-effects model, incorporating fast algorithms for genome-wide association analysis.

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Registered: 2019-08-02 18:19