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79 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.

Development Status : 5 - Production/Stable [Filter]
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Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
Topic : Optimization : Mathematical Programming : Linear Programming [Filter]

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Registered: 2007-11-27 09:48

1. lsmeans - Calculate adjusted means and standard errors for main factors and interaction terms of lm, gls, lme and lme4 models.

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Topic : Design of Experiments & Analysis of Experimental Data [Filter]
Topic : Genetics : Multiple Testing [Filter]
Topic : Multivariate Statistics : Linear Models [Filter]

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Registered: 2009-09-10 11:49

2. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.

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Registered: 2013-12-19 15:12

3. calibayesR - The package also provides a web-serivce interface to the CaliBayes system. See http://www.calibayes.ncl.ac.uk for more details.

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Topic : Bayesian Statistics : Specific Model Fitting [Filter]
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Registered: 2009-11-30 09:36

4. rneos: R interface to NEOS - R package that implements the XML-RPC interface to NEOS (http://www.neos-server.org)

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Registered: 2010-07-16 15:32

5. basisR - This package provides access to the web-services exposed by the BASIS system.

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Registered: 2009-12-15 12:37

6. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.

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Topic : Genetics : QTL Mapping [Filter]

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Registered: 2009-10-07 19:54

7. SPRINT: Simple Parallel R INTerface - SPRINT is a Simple Parallel R INTerface to High Performance Computing (HPC) that enables biologists to run statistical analysis scripts using R in parallel on HPC clusters. It consists of an HPC harness and a library of parallelized R functions.

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Registered: 2009-11-20 16:56

8. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters.

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Topic : Cluster Analysis : Hierarchical Clustering [Filter]
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Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]

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Registered: 2015-02-12 00:09

9. Protocol for Adjust & Select Models - This project is about modeling species abundances in communities.

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Registered: 2011-01-18 16:54

10. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.

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Registered: 2011-06-10 12:13

11. modis - Functions for download, mosaic, re-sample, re-project, analyse and visualise of MODIS grid data. Special attention is given to spatio-temporal change detection and phenological metric extraction.

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Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
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Registered: 2011-11-02 22:53

12. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods

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Topic : Environmetrics [Filter]
Topic : Spatial Data & Statistics : Ecological Analysis [Filter]

Registered: 2011-01-24 12:50

13. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes.

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Registered: 2011-06-10 12:24

14. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.

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Registered: 2013-11-21 21:46

15. Extremal Dependence - Extremal Dependence package provides parametric and nonparametric statistical methods for modelling and estimating the dependence of extreme values

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Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2014-12-02 11:09

16. vcf2geno: reading VCF made easy - Efficiently Read Variant Call Format (VCF) into R

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Registered: 2012-08-22 01:29

17. getMODIS - The "getMODIS" package is not further developed. Please install the "MODIS" package instead!

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Registered: 2011-08-10 11:10

18. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.

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Registered: 2010-02-08 16:57

19. cran2deb - debianize CRAN - cran2deb automatically converts CRAN packages for R into Debian packages, handling dependency matching and package updates nicely.

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Registered: 2008-09-11 19:33

79 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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