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39 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods
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- Development Status : 1 - Planning [Filter]
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Registered: 2011-01-24 12:50 |
1. Grid-based symbols - Grid-based matplots, boxplots, barplots, stars and symbols for visualization in arbitrary context like maps or cluster solutions.
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- Development Status : 4 - Beta [Filter]
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Registered: 2010-01-11 10:17 |
2. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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- Development Status : 4 - Beta [Filter]
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- Programming Language : Perl [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2013-11-21 21:46 |
3. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
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Registered: 2013-12-19 15:12 |
4. Soil water - The project has now moved to GitHub: https://github.com/julienmoeys/soilwater
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- Development Status : 5 - Production/Stable [Filter]
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Registered: 2010-08-17 21:13 |
5. The Soil Texture Wizard - The project has now moved to GitHub: https://github.com/julienmoeys/soiltexture
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Registered: 2010-04-08 12:28 |
6. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
7. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters.
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
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Registered: 2015-02-12 00:09 |
8. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
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- Development Status : 4 - Beta [Filter]
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- Topic : Bayesian Statistics [Filter]
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- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
9. Hadoop Streaming - Provides a framework for writing map/reduce scripts for use in Hadoop Streaming. Also facilitates operating on data in a streaming fashion, without Hadoop.
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- Development Status : 3 - Alpha [Filter]
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Registered: 2009-03-19 14:46 |
10. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
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Registered: 2013-05-29 18:34 |
11. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided.
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- Topic : Chemoinformatics [Filter]
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Registered: 2010-04-25 17:27 |
12. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package.
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- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2010-11-19 22:28 |
13. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2011-03-23 10:20 |
14. RXKCD - This package allows the visualization of your favorite XKCD comic strip directly from R
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Registered: 2011-07-10 13:54 |
15. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.
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- Development Status : 3 - Alpha [Filter]
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Registered: 2011-11-04 17:46 |
16. getMODIS - The "getMODIS" package is not further developed. Please install the "MODIS" package instead!
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- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
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Registered: 2011-08-10 11:10 |
17. FLR - A framework for fisheries modelling and management strategy simulation in R. Models can used to generate accurate simulations of fishery systems: stocks, fleets, assessment and management processes. http://flr-project.org
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2008-12-10 14:47 |
18. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.
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- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2010-01-08 16:59 |
19. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.
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- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2007-11-27 09:48 |
39 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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