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 Topic > Genetics
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6 projects in result set.
0. Genotype Database Framework - GT.DB is a database framework for efficiently managing genome-wide genotype datasets (i.e. 10^6 or more biallelic markers, 1000s of samples), as well as underlying raw data and complex phenotype data, tightly integrated with R libraries for analysis.
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Registered: 2009-09-17 00:13 |
1. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties.
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Registered: 2011-10-11 08:51 |
2. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
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Registered: 2010-03-05 10:51 |
3. plantbreeding - plantbreeding: R Software package for analysis and visualization of data from plant breeding and genetics experiments.
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Registered: 2012-07-01 21:32 |
4. Statistical analysis of DNA mixtures - Statistical analysis of mixed traces of DNA with artefacts. Features include parameter-fitting, visual diagnostics, evaluation of the likelihood, and genotype prediction. Full functionality requires a licenced copy of Hugin (www.hugin.com).
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Registered: 2013-07-07 18:26 |
5. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
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Registered: 2013-05-29 18:34 |
