Software Map

Project Tree

Project Tree

Now limiting view to projects in the following categories:
Natural Language :: English [Remove This Filter]
Development Status :: 4 - Beta [Remove This Filter]
License :: OSI Approved :: GNU General Public License (GPL) [Remove This Filter]
Operating System :: OS Independent [Remove This Filter]

Topic > Genetics

Linkage, LD and Haplotype Mapping (8 project)
Multiple Testing (4 project)
Phylogenetics (20 project)
Population Genetics (12 project)
QTL Mapping (3 project)

Browse By:

3 projects in result set.

0. Statistical analysis of DNA mixtures - Statistical analysis of mixed traces of DNA with artefacts. Features include parameter-fitting, visual diagnostics, evaluation of the likelihood, and genotype prediction. Full functionality requires a licenced copy of Hugin (www.hugin.com).

Development Status : 4 - Beta (Now Filtering)
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
Natural Language : English (Now Filtering)
Operating System : OS Independent (Now Filtering)
Programming Language : R [Filter]
Topic : Genetics [Filter]
Topic : Graphical Models [Filter]

Activity Percentile: 0.00

Registered: 2013-07-07 18:26

1. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties.

Development Status : 4 - Beta (Now Filtering)
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
Natural Language : English (Now Filtering)
Operating System : OS Independent (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bayesian Statistics [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Genetics [Filter]

Activity Percentile: 0.00

Registered: 2011-10-11 08:51

2. Genotype Database Framework - GT.DB is a database framework for efficiently managing genome-wide genotype datasets (i.e. 10^6 or more biallelic markers, 1000s of samples), as well as underlying raw data and complex phenotype data, tightly integrated with R libraries for analysis.

Development Status : 4 - Beta (Now Filtering)
Environment : Other Environment [Filter]
Intended Audience : Developers [Filter]
License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
Natural Language : English (Now Filtering)
Operating System : OS Independent (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : Other [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics [Filter]
Topic : Database [Filter]
Topic : Genetics [Filter]

Activity Percentile: 0.00

Registered: 2009-09-17 00:13