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58 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. optparse, argparse: command line parsers - Development of getopt, optparse, and argparse has moved to Github. Try out http://www.github.com/trevorld/argparse, http://www.github.com/trevorld/optparse, or http://www.github.com/trevorld/getopt .
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Registered: 2009-07-22 19:43 |
1. waveslim: Wavelet methods for 1/2/3D - Basic wavelet routines for the processing/analysis/inference of time series, images and 3D arrays. The code provided here is based on Percival and Walden (2000); Gencay, Selcuk and Whitcher (2001); Kingsbury (1999); and Selesnick (200?).
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Registered: 2009-02-26 17:20 |
2. Genotype Database Framework - GT.DB is a database framework for efficiently managing genome-wide genotype datasets (i.e. 10^6 or more biallelic markers, 1000s of samples), as well as underlying raw data and complex phenotype data, tightly integrated with R libraries for analysis.
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Registered: 2009-09-17 00:13 |
3. a logging package - the logging package is a port of the ubiquitous log4j.
it implements hierarchical logging, multiple handlers at a single logger, formattable log records...
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Registered: 2010-01-22 15:47 |
4. Probability - This package is for performing elementary probability on finite sample spaces, represented by data frames or lists. Functionality includes setting up sample spaces, set algebra, probability and conditional probability, characteristic functions, and more.
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Registered: 2008-01-09 17:16 |
5. Markov decision processes (MDPs) in R - Create and optimize MDPs with discrete time steps and state space. Both normal MDPs and hierarchical MDPs can be considered.
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Registered: 2009-06-08 12:06 |
6. Iterator Tools - The itertools package contains various functions and utilities for creating iterators. It can be viewed as an extension to the iterators package.
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Registered: 2009-12-28 23:04 |
7. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties.
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Registered: 2011-10-11 08:51 |
8. fisheyeR - Fisheye and Hyperbolic-space-alike Interactive Visualization Tools in R.
fisheyeR provides tools for creating Interactive Data Visualizations.
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Registered: 2010-01-10 16:39 |
9. depmixS4 - hidden Markov model classes - Note: we have moved development over to GitHub at https://github.com/depmix/depmixS4
depmixS4 fits hidden Markov models on multi-var time series, subject to constraints on the parameters. Responses are from glm and some additional distributions; transitions can be time-dependent.
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Registered: 2008-02-27 11:12 |
10. Mutoss - Mutoss (multiple hypotheses testing in an open software system) aims at providing a unified, extensible interface covering a large spectrum of multiple hypotheses testing procedures in R. Features a GUI and a simulation tool. Funded by PASCAL2.
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Registered: 2010-02-11 12:32 |
11. RFLPtools - RFLPtools provides functions to analyse DNA fragment samples (i.e. derived from RFLP-analysis) and standalone BLAST report files (i.e. DNA sequence analysis).
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Registered: 2010-02-24 09:24 |
12. linprog: Linear Programming/Optimization - This package can be used to solve Linear Programming / Linear optimization problems by using the simplex algorithm.
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Registered: 2009-12-25 16:29 |
13. gwidgets - The gWidgets API provides a standardized interface to several GUI toolkits accessible through R packages.
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Registered: 2010-04-28 01:04 |
14. Yasomi: Self-Organising Map in R - Yasomi is Yet Another Self-Organising Map Implementation. It provides an implementation of Kohonen's SOM, with extension to kernel variants and comprehensive visualisation capabilities.
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Registered: 2011-02-25 12:40 |
15. idbg - Idbg - R debugger
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Registered: 2010-07-04 19:29 |
16. R interface to GEOS - The package provides tools for interfacing the C++ translation of the Java Topology Suite (GEOS from JTS).
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Registered: 2009-11-11 10:55 |
17. delftfews - delftfews is a timeseries library extending zoo. it aims at offering a usable base of functions for handling sets of time series in a water management framework.
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Registered: 2010-05-11 12:39 |
18. RpepXML - R pepXML is an R interface to the pepXML standard for MSMS data identification. It allows pepXML files to be imported into R and for easy manipulation and filtering.
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Registered: 2010-09-03 21:34 |
19. QSAR Data Sets - Molecular descriptors and outcomes for several public domain data sets
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Registered: 2010-09-19 03:40 |
58 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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