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23 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes. |
- Development Status : 5 - Production/Stable [Filter]
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Registered: 2011-06-10 12:24 |
1. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
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Registered: 2010-01-08 16:59 |
2. Estimation and Model Checking for GLSM - This package mainly deals with generalized linear spatial models for estimation, model checking and prediction by using MCMC algorithms. |
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-17 10:52 |
3. Protocol for Adjust & Select Models - This project is about modeling species abundances in communities. |
- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
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Registered: 2011-01-18 16:54 |
4. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations |
- Development Status : 4 - Beta [Filter]
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Registered: 2011-02-02 00:51 |
5. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data. |
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- Natural Language : Russian [Filter]
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Registered: 2010-10-20 17:09 |
6. soRvi - avoimen datan työkalupakki - soRvi on avoimen datan työkalupakki, joka tarjoaa laskennallisia välineitä avointen rajapintojen kautta saatavien tietoaineistojen hakuun, siivoamiseen, yhdistelyyn, louhintaan ja visualisointiin tukien erityisesti suomalaista avoimen datan yhteisöä. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2011-10-07 15:24 |
7. Graphical Multiple Comparison Procedure - This package provides functions and a graphical user interface for graphical described multiple test procedures (sequentially rejective, Simes and parametric). |
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Registered: 2010-02-17 13:06 |
8. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation. |
- Development Status : 3 - Alpha [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Multiple Testing [Filter]
- Topic : Multivariate Statistics [Filter]
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Registered: 2010-03-21 02:01 |
9. Mutoss - Mutoss (multiple hypotheses testing in an open software system) aims at providing a unified, extensible interface covering a large spectrum of multiple hypotheses testing procedures in R. Features a GUI and a simulation tool. Funded by PASCAL2. |
- Development Status : 4 - Beta [Filter]
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Registered: 2010-02-11 12:32 |
10. cvr - Developers, End Users/Desktop |
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Registered: 2009-11-15 18:02 |
11. prepRISA - This package can be used to prepare ARISA data files for multivariate analysis. |
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Registered: 2009-11-20 09:49 |
12. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD. |
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- Topic : Computational Physics [Filter]
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- Topic : High Performance Computing : Large Memory [Filter]
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Registered: 2009-06-17 16:54 |
13. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods |
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- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-01-24 12:50 |
14. SciViews - SciViews: a R GUI API, and a R GUI extension for Komodo Edit. |
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Registered: 2008-05-26 16:41 |
15. TopKLists - The package includes tools for inference, aggregation, and visualization of multiple ranked lists. Consolidated information from two or more such lists comprising the same set of objects can be obtained. Incomplete rankings and partial lists are allowed. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Marketing & Business Analytics [Filter]
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Registered: 2010-05-06 10:59 |
16. radR - processing of radar data in R - radR retrieves data from your live radar or recorded archive and analyses it for features, which are saved in replayable files that are much smaller than raw data sets. You can extend radR via plugins. |
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Registered: 2007-11-20 20:30 |
17. Lifetable Calculations - Allows the calculation of lifetables using demographic methods, and particularly the estimation of life expectancy in people at increased relative risk and excess risk of death. Status - Working, but only limited features. Email for now if you want it. |
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Registered: 2007-08-12 12:32 |
18. Multivariate Projection Methods - mpm is an R package by Paul Lewi and Luc Wouters for exploratory multivariate analysis of large data matrices, such as gene expression data from microarray experiments. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Multivariate Statistics : Correspondence Analysis [Filter]
- Topic : Multivariate Statistics : Projection Methods [Filter]
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Registered: 2008-01-29 14:46 |
19. crop - The package crop provides an interface to system tools (on Unix-like operating systems) to crop graphics. |
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Registered: 2015-10-18 18:40 |
23 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>