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38 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis.
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Registered: 2011-09-26 05:04 |
1. Mutoss - Mutoss (multiple hypotheses testing in an open software system) aims at providing a unified, extensible interface covering a large spectrum of multiple hypotheses testing procedures in R. Features a GUI and a simulation tool. Funded by PASCAL2.
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Registered: 2010-02-11 12:32 |
2. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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Registered: 2012-08-10 08:48 |
3. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.
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Registered: 2009-06-17 16:54 |
4. HAB bathymetry models - R implementation of the remote sensing based Hydraulically Assisted Bathymetry models (HAB) developed by Fonstad, M. & Marcus, W. (2005). Functions are provided for modelling with a range of custom variables. Summary functions are provided as well.
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Registered: 2009-05-08 10:01 |
5. TradeAnalytics - Transaction-oriented infrastructure for defining instruments, transactions, portfolios and accounts for trading systems and strategy simulation. Provides portfolio support for multi-asset class and multi-currency portfolios. Still in heavy development.
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Registered: 2008-12-09 03:28 |
6. Conditional Random Fields - This project provides a set of tools for conditional random fields tasks such as decoding/inference/sampling/training.
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Registered: 2010-12-28 07:13 |
7. splinesurv - A package containing utilities for nonparametric Bayesian analysis of clustered survival data. The baseline hazard function and frailty density are modeled using penalized B-splines. Regression and spline parameters are estimated via MCMC.
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Registered: 2008-01-08 16:50 |
8. Markov decision processes (MDPs) in R - Create and optimize MDPs with discrete time steps and state space. Both normal MDPs and hierarchical MDPs can be considered.
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Registered: 2009-06-08 12:06 |
9. Direct labels for plots - Simple, uniform framework for adding direct labels to lattice or ggplot2 plots.
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Registered: 2009-07-17 12:58 |
10. RpepXML - R pepXML is an R interface to the pepXML standard for MSMS data identification. It allows pepXML files to be imported into R and for easy manipulation and filtering.
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Registered: 2010-09-03 21:34 |
11. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy.
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Registered: 2014-06-28 12:14 |
12. Harmony - This package is a natural language processing (NLP) library that allows users to access large language models and use them to compare datasets where variable names are in unstructured text form. The target users are often academic researchers in the social sciences, such as psychology/mental health. We are actively recruiting contributors. We have an existing Python library also.
The source code is at: https://github.com/harmonydata/harmony_r
The web front-end of the tool is at: https://harmonydata.ac.uk/
What does Harmony do?
* Psychologists and social scientists often have to match items in different questionnaires, such as "I often feel anxious" and "Feeling nervous, anxious or afraid".
* This is called harmonisation.
* Harmonisation is a time consuming and subjective process.
* Going through long PDFs of questionnaires and putting the questions into Excel is no fun.
* Enter Harmony, a tool that uses natural language processing and generative AI models to help researchers harmonise questionnaire items, even in different languages.
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Registered: 2025-02-13 10:40 |
13. aroma.* packages [MOVED TO GITHUB] - This repository and all of its packages have been moved to https://github.com/HenrikBengtsson/
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Registered: 2009-05-19 20:01 |
14. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
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Registered: 2013-05-29 18:34 |
15. partykit: Recursive Partytioning Toolkit - Infrastructure for representing, summarizing, and visualizing tree-structured models. It can be used for constructing or reading tree models from different sources (rpart, RWeka, PMML), sharing
functionality for print/plot/predict methods.
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- Topic : Machine Learning : Recursive Partitioning [Filter]
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Registered: 2008-09-30 11:39 |
16. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations
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Registered: 2011-02-02 00:51 |
17. trip -- animal tracking data - The development of trip package is now hosted on GitHub,
https://github.com/mdsumner/trip
MDSumner 2013-07-04
Location estimation, track and spatial analysis for animal tag data.
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Registered: 2010-06-24 02:07 |
18. Analysis of Count Time Series - R package which provides likelihood-based methods for model fitting and assessment, prediction and intervention analysis of count time series following generalized linear models.
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- Topic : Econometrics : Structural Change [Filter]
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Registered: 2013-04-04 13:48 |
19. Probability - This package is for performing elementary probability on finite sample spaces, represented by data frames or lists. Functionality includes setting up sample spaces, set algebra, probability and conditional probability, characteristic functions, and more.
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Registered: 2008-01-09 17:16 |
38 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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