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31 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Machine Learning : Bayesian Methods [Filter]
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Registered: 2009-02-18 09:38 |
1. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Genetics [Filter]
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Registered: 2011-03-23 10:20 |
2. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
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- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2010-01-08 16:59 |
3. cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series |
- Development Status : 4 - Beta [Filter]
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- Topic : Time Series [Filter]
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Registered: 2008-12-12 11:07 |
4. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods |
- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
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- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-01-24 12:50 |
5. umx: A helper library for SEM in OpenMx - umx provides functions making it easy to build, run, modify, and report the results of Structural Equation Models (SEM) using OpenMx. Examples include setting start values: umxStart(); labels: umxLabel(); and reporting; umxSummary(). |
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- Topic : Genetics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Optimization : General Purpose Continuous Solvers [Filter]
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Registered: 2013-08-28 13:52 |
6. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association. |
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Registered: 2012-08-10 08:48 |
7. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl |
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- Topic : Genetics : Phylogenetics [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2011-06-14 14:51 |
8. calibFit - This package provides curve fitting, visualization, and calibration methods for the development, validation, and use of biological and chemical assays. The functionality includes heteroscedasticity, model selection, and measures of assay quality. |
- Development Status : 6 - Mature [Filter]
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- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
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- Topic : Regression Models [Filter]
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Registered: 2011-10-25 17:59 |
9. rGEDI - rGEDI: NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing |
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2020-03-12 20:57 |
10. The Soil Texture Wizard - The project has now moved to GitHub: https://github.com/julienmoeys/soiltexture |
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Registered: 2010-04-08 12:28 |
11. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition. |
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
12. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking. |
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- Topic : Bayesian Statistics [Filter]
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- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
13. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided. |
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- Topic : Chemoinformatics [Filter]
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Registered: 2010-04-25 17:27 |
14. Tools for Uplift Modeling - The R Package tools4uplift integrates some tools for exploring and modeling uplift. The content can be separated into the following steps of statistical modeling: quantization, visualization, model selection and model validation. |
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Registered: 2018-08-31 21:23 |
15. RXKCD - This package allows the visualization of your favorite XKCD comic strip directly from R |
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Registered: 2011-07-10 13:54 |
16. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2011-11-04 17:46 |
17. modis - Functions for download, mosaic, re-sample, re-project, analyse and visualise of MODIS grid data. Special attention is given to spatio-temporal change detection and phenological metric extraction. |
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Registered: 2011-11-02 22:53 |
18. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions. |
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2012-03-28 07:52 |
19. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems. |
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- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2007-11-27 09:48 |
31 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>