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28 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
1. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
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Registered: 2010-04-01 17:54 |
2. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2011-03-23 10:20 |
3. Polyphase - This method accepts the genotype data, the relative physical position of the markers for species of any ploidy and returns the phased output.
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2016-02-18 15:57 |
4. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.
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Registered: 2011-06-10 12:13 |
5. Estimation and Model Checking for GLSM - This package mainly deals with generalized linear spatial models for estimation, model checking and prediction by using MCMC algorithms.
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
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Registered: 2011-08-17 10:52 |
6. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
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- Topic : Bayesian Statistics [Filter]
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Registered: 2011-08-18 03:20 |
7. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided.
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Registered: 2010-04-25 17:27 |
8. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.
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- Topic : Machine Learning : Bayesian Methods [Filter]
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Registered: 2009-02-18 09:38 |
9. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
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Registered: 2013-05-29 18:34 |
10. wtJonckheere - Non-parametric Jonckheere-Terpstra trend test on weighted data
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Registered: 2014-06-20 10:11 |
11. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.
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Registered: 2009-02-18 10:01 |
12. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.
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- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2007-11-27 09:48 |
13. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation.
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Registered: 2010-11-19 22:27 |
14. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.
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Registered: 2009-06-17 16:54 |
15. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows.
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Registered: 2008-08-04 05:27 |
16. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods
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- Topic : Environmetrics [Filter]
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Registered: 2011-01-24 12:50 |
17. X-METRIC Inventory Optimizations - Multi-Echelon Techniques for Recoverable Item Control and its variants MOD-METRIC, VARI-METRIC and related extensions
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Registered: 2013-08-24 22:00 |
18. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2012-03-28 07:52 |
19. vcf2geno: reading VCF made easy - Efficiently Read Variant Call Format (VCF) into R
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Registered: 2012-08-22 01:29 |
28 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
