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38 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs. |
- Development Status : 5 - Production/Stable [Filter]
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Registered: 2011-03-23 10:20 |
1. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Machine Learning : Bayesian Methods [Filter]
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Registered: 2009-02-18 09:38 |
2. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
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- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2010-01-08 16:59 |
3. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods |
- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
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Registered: 2011-01-24 12:50 |
4. Optimal Two-stage Phase II Design - This R package creates the optimal two-stage phase II designs with long-term endpoint.
A later expanded version of the package (OptInterim) can be downloaded on CRAN
http://cran.r-project.org/web/packages/OptInterim/index.html |
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- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2008-12-14 01:13 |
5. cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series |
- Development Status : 4 - Beta [Filter]
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Registered: 2008-12-12 11:07 |
6. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association. |
- Development Status : 4 - Beta [Filter]
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Registered: 2012-08-10 08:48 |
7. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps. |
- Development Status : 4 - Beta [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-06-23 07:05 |
8. rGEDI - rGEDI: NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing |
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
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Registered: 2020-03-12 20:57 |
9. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition. |
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
10. calibFit - This package provides curve fitting, visualization, and calibration methods for the development, validation, and use of biological and chemical assays. The functionality includes heteroscedasticity, model selection, and measures of assay quality. |
- Development Status : 6 - Mature [Filter]
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- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
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- Topic : Regression Models [Filter]
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Registered: 2011-10-25 17:59 |
11. Easy database interface - Simple database interface for SQLite, MySQL and MS Access. It provides functions for easily reading, writing, listing and subsetting tables in SQLite, MySQL and MS Access. easydb is build on top of RSQLite and RODBC. |
- Development Status : 4 - Beta [Filter]
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Registered: 2011-08-19 09:26 |
12. The Soil Texture Wizard - The project has now moved to GitHub: https://github.com/julienmoeys/soiltexture |
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Registered: 2010-04-08 12:28 |
13. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows. |
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
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Registered: 2008-08-04 05:27 |
14. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking. |
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- Topic : Bayesian Statistics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
15. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided. |
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- Topic : Chemoinformatics [Filter]
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Registered: 2010-04-25 17:27 |
16. cameratraps - Process and manage camera traps data: images, videos, no database, no fuss.
Images and videos are stored on a filesystem, NAS hardware is cheap.
The package takes care of cataloguing and carrying out basic analysis.
Loosely inspored by Rovero and Zimmerman (2016)
https://doi.org/10.1002/jwmg.21293 |
- Development Status : 2 - Pre-Alpha [Filter]
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Registered: 2019-08-08 11:35 |
17. modis - Functions for download, mosaic, re-sample, re-project, analyse and visualise of MODIS grid data. Special attention is given to spatio-temporal change detection and phenological metric extraction. |
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Registered: 2011-11-02 22:53 |
18. RXKCD - This package allows the visualization of your favorite XKCD comic strip directly from R |
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Registered: 2011-07-10 13:54 |
19. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers. |
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Registered: 2011-11-04 17:46 |
38 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>