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61 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods |
- Development Status : 1 - Planning [Filter]
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- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-01-24 12:50 |
1. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. |
- Development Status : 4 - Beta [Filter]
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- Programming Language : Perl [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2013-11-21 21:46 |
2. Extreme Values in R (evir) - Extreme Value in R: Functions for extreme value theory, which may be divided into the following groups; exploratory data analysis, block maxima, peaks over thresholds (univariate and bivariate), point processes, gev/gpd distributions. |
- Development Status : 4 - Beta [Filter]
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- Programming Language : R [Filter]
- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Risk Management [Filter]
- Topic : Time Series [Filter]
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Registered: 2011-03-21 13:20 |
3. Polyphase - This method accepts the genotype data, the relative physical position of the markers for species of any ploidy and returns the phased output. |
- Development Status : 3 - Alpha [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2016-02-18 15:57 |
4. Function value data spatial prediction - geofd implements some methods for making spatial prediction of functional correlated data |
- Development Status : 3 - Alpha [Filter]
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- Natural Language : Spanish [Filter]
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- Programming Language : R [Filter]
- Programming Language : Tcl [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2010-05-13 08:53 |
5. rGEDI - rGEDI: NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing |
- Development Status : 4 - Beta [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
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Registered: 2020-03-12 20:57 |
6. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data. |
- Development Status : 5 - Production/Stable [Filter]
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- Natural Language : Russian [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
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- Programming Language : Java [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
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Registered: 2010-10-20 17:09 |
7. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm. |
- Development Status : 3 - Alpha [Filter]
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- Topic : Bayesian Statistics [Filter]
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- Topic : Graphical Models [Filter]
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Registered: 2011-01-07 17:53 |
8. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
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Registered: 2009-02-18 10:01 |
9. X-METRIC Inventory Optimizations - Multi-Echelon Techniques for Recoverable Item Control and its variants MOD-METRIC, VARI-METRIC and related extensions |
- Development Status : 1 - Planning [Filter]
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- Topic : Optimization [Filter]
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Registered: 2013-08-24 22:00 |
10. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp |
- Development Status : 4 - Beta [Filter]
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- Natural Language : German [Filter]
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- Topic : Bioinformatics [Filter]
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- Topic : High Performance Computing [Filter]
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Registered: 2013-05-29 18:34 |
11. Parallel computations in R - This package uses and extends parallel infrastructure available in R and provides various applications in HPC. |
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Registered: 2007-01-28 18:20 |
12. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
- Development Status : 5 - Production/Stable [Filter]
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- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
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Registered: 2010-01-08 16:59 |
13. Hadoop Streaming - Provides a framework for writing map/reduce scripts for use in Hadoop Streaming. Also facilitates operating on data in a streaming fashion, without Hadoop. |
- Development Status : 3 - Alpha [Filter]
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- Programming Language : Unix Shell [Filter]
- Topic : Software Development [Filter]
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Registered: 2009-03-19 14:46 |
14. Forecasting with Artificial Intelligence - The package ForAI uses machine learning methods such as artificial neural networks, support vector regression, extreme learning machines, and evolutionary algorithms for forecasting and prediction. |
- Development Status : 3 - Alpha [Filter]
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- Programming Language : R [Filter]
- Topic : Machine Learning [Filter]
- Topic : Optimization [Filter]
- Topic : Regression Models [Filter]
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Registered: 2012-01-22 07:45 |
15. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes. |
- Development Status : 5 - Production/Stable [Filter]
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- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
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- Topic : Time Series [Filter]
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Registered: 2011-06-10 12:24 |
16. cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series |
- Development Status : 4 - Beta [Filter]
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- Programming Language : R [Filter]
- Topic : Time Series [Filter]
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Registered: 2008-12-12 11:07 |
17. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0. |
- Development Status : 2 - Pre-Alpha [Filter]
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- Programming Language : R [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2011-06-10 12:13 |
18. wtJonckheere - Non-parametric Jonckheere-Terpstra trend test on weighted data |
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- Topic : Robust Statistics [Filter]
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Registered: 2014-06-20 10:11 |
19. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters. |
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- Programming Language : R [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2015-02-12 00:09 |
61 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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