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49 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes.

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Topic : Bioinformatics : Statistics [Filter]
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Registered: 2011-06-10 12:24

1. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.

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Programming Language : Perl [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Biostatistics & Medical Statistics [Filter]

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Registered: 2013-11-21 21:46

2. R-Hydro - Hydrological models and tools to represent and analyze hydrological data

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Registered: 2009-04-26 20:49

3. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.

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Registered: 2013-12-19 15:12

4. RNetCDF - R Interface to NetCDF Datasets

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Registered: 2014-12-30 23:43

5. BaSTA - This package estimates mortality with covariates from capture-recapture/recovery data in a Bayesian framework when many individuals are of unknown age. It includes tools for data checking, model diagnostics and outputs such as life-tables and plots.

Development Status : 3 - Alpha [Filter]
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Topic : Bayesian Statistics : General Model Fitting [Filter]

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Registered: 2011-07-11 13:52

6. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.

Development Status : 4 - Beta [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Genetics : QTL Mapping [Filter]

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Registered: 2009-10-07 19:54

7. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters.

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Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]

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Registered: 2015-02-12 00:09

8. modis - Functions for download, mosaic, re-sample, re-project, analyse and visualise of MODIS grid data. Special attention is given to spatio-temporal change detection and phenological metric extraction.

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Registered: 2011-11-02 22:53

9. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods

Development Status : 1 - Planning [Filter]
Development Status : 2 - Pre-Alpha [Filter]
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Topic : Environmetrics [Filter]
Topic : Spatial Data & Statistics : Ecological Analysis [Filter]

Registered: 2011-01-24 12:50

10. rGEDI - rGEDI: NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing

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Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2020-03-12 20:57

11. getMODIS - The "getMODIS" package is not further developed. Please install the "MODIS" package instead!

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Registered: 2011-08-10 11:10

12. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.

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Topic : Environmetrics [Filter]
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Registered: 2010-02-08 16:57

13. Variant Pattern Analyzer - VPA (Variant Pattern Analyzer) is an R package for prioritizing variants with user-specified frequency pattern from multiple study subjects in next generation sequencing study.

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Registered: 2011-08-05 14:30

14. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.

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Registered: 2011-11-04 17:46

15. R2scheme - Compile R code to binary machine code and dynamically link the binary to R using the bigloo scheme compiler.

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Programming Language : Lisp [Filter]
Topic : Software Development : Compilers [Filter]

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Registered: 2010-11-03 09:48

16. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.

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Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
Topic : Optimization : Mathematical Programming : Linear Programming [Filter]

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Registered: 2007-11-27 09:48

17. Instrument Limit of Detection Modeling - Limit of Detection (LOD) reflects an (medical diagnostic) instrument's level of sensitivity. We develop the LOD model selection and estimation tools with application to medical diagnostic instruments.

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Registered: 2011-11-14 17:17

18. RXKCD - This package allows the visualization of your favorite XKCD comic strip directly from R

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Registered: 2011-07-10 13:54

19. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl

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Topic : Genetics : Phylogenetics [Filter]
Topic : Genetics : Population Genetics [Filter]

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Registered: 2011-06-14 14:51

49 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>