Software Map
Project Tree
Now limiting view to projects in the following categories:
Operating System :: POSIX :: Linux [Remove This Filter]
Programming Language :: R [Remove This Filter]
Intended Audience :: Developers [Remove This Filter]
Intended Audience :: End Users/Desktop [Remove This Filter]
78 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. XGR - eXploring Genomic Relations (XGR) at the gene and SNP level through enrichment analysis, similarity analysis and network analysis
|
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Database [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2016-04-01 13:46 |
1. Rigorous Analytics - Software for the quantitative analysis of medical imaging data. Medical imaging data formats include DICOM, AFNI, ANALYZE and NIfTI.
|
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : BSD License [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-01-18 10:18 |
2. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm.
|
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics [Filter]
- Topic : Genetics [Filter]
- Topic : Graphical Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-01-07 17:53 |
3. Priority Index - Priority Index or PI accelerates target selection through networking genetic evidence.
|
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2016-04-21 23:06 |
4. Modelling Peaks Over Threshold - The project consists in developing functions for peaks over threshold modeling. Most of results come from the extreme value theory (EVT). The EVT is currently extensively used, mostly in environmental sciences and finance.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Finance : Risk Management : Value at Risk [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2007-09-21 14:29 |
5. TreeHotspots - Classification trees can identify multiple clusters at many different scales at various angles.
We find "hotspots", i.e. regions of high and low densities or rates w.r.t. some baseline.
|
- Development Status : 3 - Alpha [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : Public Domain [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Cluster Analysis : Partitioning Clustering [Filter]
- Topic : Spatial Data & Statistics : Disease Mapping and Areal Data Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2016-03-16 13:24 |
6. yags: modular GEE solver - yags is a modular solver for generalized estimating equations.
|
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Robust Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-01-04 12:17 |
7. Finite Mixure of AFT and FMR models - FMRS package provides estimation and variable selection in Finite Mixture of Accelerated Failure Time Regression (FMAFTR) and Finite Mixture of Regression (FMR) models with a large number of covariates and/or right censoring and heterogeneous structure.
|
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Machine Learning : Model Selection and Validation [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2016-03-07 02:31 |
8. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : High Performance Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-19 22:27 |
9. qsaR in R - This project aims at building a flexible framework for working with QSAR in R.
|
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : BSD License [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Java [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Chemoinformatics [Filter]
- Topic : Machine Learning [Filter]
|
Activity Percentile: 0.00
Registered: 2012-10-22 23:24 |
10. dcGOR - dcGOR is a package for analysing domain-centric ontologies and annotations. It includes: enrichment analysis and visualisation; construction of a domain (semantic similarity) network; significance analysis for a contact network.
|
- Development Status : 6 - Mature [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Database [Filter]
|
Activity Percentile: 0.00
Registered: 2014-10-23 15:21 |
11. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.
|
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Other [Filter]
- Programming Language : R (Now Filtering)
- Topic : High Performance Computing : Parallel Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2011-06-10 12:13 |
12. Optimal Two-stage Phase II Design - This R package creates the optimal two-stage phase II designs with long-term endpoint.
A later expanded version of the package (OptInterim) can be downloaded on CRAN
http://cran.r-project.org/web/packages/OptInterim/index.html
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Web Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Optimization [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2008-12-14 01:13 |
13. Classification and Regression Training - The caret packages contain functions for tuning predictive models, pre-processing, variable importance and other tools related to machine learning and pattern recognition. Parallel processing versions of the main package are also included.
|
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Machine Learning : Model Selection and Validation [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2008-06-05 19:31 |
14. R package for Non Smooth Optimization - An R package for non smooth optimization, with implementation of several algorithms including HANSO, SIDPSM etc.
|
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Optimization [Filter]
|
Activity Percentile: 0.00
Registered: 2013-05-28 18:22 |
15. Micro-magnet Dynamics Simulation Package - Magnets is a numerical simulation package aiming at helping physicists
and electrical engineers who are interested in studying the micro-magnet spin system, which is one of the future integrated circuits with the privilege of low energy consumption.
|
- Development Status : 3 - Alpha [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Education [Filter]
- Topic : Graphics : Dynamic Graphics [Filter]
- Topic : Numerical Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2010-05-05 23:51 |
16. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2014-09-23 08:50 |
17. arules - Mining Association Rules - Infrastructure for representing, manipulating and analyzing transaction data and patterns (frequent itemsets and association rules).
arules is now maintained on Github: https://github.com/mhahsler/arules
|
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Machine Learning [Filter]
|
Registered: 2007-05-21 13:55 |
18. seriation - Infrastructure for seriation - Infrastructure for seriation with an implementation of several seriation/sequencing techniques to reorder matrices, dissimilarity matrices, and dendrograms. Seriation is now maintained on githup at http://github.com/mhahsler/seriation
|
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
- Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
|
Registered: 2008-02-01 22:32 |
19. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2011-06-23 07:05 |
78 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
