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46 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.
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Registered: 2010-01-08 16:59 |
1. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).
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Registered: 2011-05-10 20:54 |
2. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.
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Registered: 2011-11-04 17:46 |
3. Data Analysis Using Regression - R functions for processing lm, glm, and polr outputs. This is a lite version of arm that does not deal with mer class.
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Registered: 2008-07-24 04:32 |
4. speedR - speedR:An R-package for interactive GUI-based data import, filtering and complex ready-to-use code generation to speed up your productivity. speedR recognizes fi le formats like Excel (.xls and .xlsx), open office calc, .csv and .txt fi les automatically.
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Registered: 2010-10-29 08:48 |
5. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.
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Registered: 2009-06-17 16:54 |
6. Soil water - The project has now moved to GitHub: https://github.com/julienmoeys/soilwater
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Registered: 2010-08-17 21:13 |
7. addendum - Utility functions that should have been in R: easy glmnet, pretty graphing and swift debugging and profiling.
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- Topic : Machine Learning : Model Selection and Validation [Filter]
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Registered: 2011-06-17 13:35 |
8. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
9. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory.
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Registered: 2009-10-02 07:07 |
10. CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM.
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Registered: 2013-11-14 14:32 |
11. RHRV - Package for carrying out heart rate variability studies of ECG records
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Registered: 2010-10-14 10:22 |
12. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages.
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Registered: 2014-09-23 08:50 |
13. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods
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Registered: 2011-01-24 12:50 |
14. Harmony - This package is a natural language processing (NLP) library that allows users to access large language models and use them to compare datasets where variable names are in unstructured text form. The target users are often academic researchers in the social sciences, such as psychology/mental health. We are actively recruiting contributors. We have an existing Python library also.
The source code is at: https://github.com/harmonydata/harmony_r
The web front-end of the tool is at: https://harmonydata.ac.uk/
What does Harmony do?
* Psychologists and social scientists often have to match items in different questionnaires, such as "I often feel anxious" and "Feeling nervous, anxious or afraid".
* This is called harmonisation.
* Harmonisation is a time consuming and subjective process.
* Going through long PDFs of questionnaires and putting the questions into Excel is no fun.
* Enter Harmony, a tool that uses natural language processing and generative AI models to help researchers harmonise questionnaire items, even in different languages.
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Registered: 2025-02-13 10:40 |
15. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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Registered: 2012-03-28 07:52 |
16. ZooImage - ZooImage is a software (based on R and ImageJ) to analyze plankton samples, using image analysis and machine learning techniques. This is the old repository, please, look at https://github.com/SciViews/zooimage for latest version!
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Registered: 2009-02-18 14:57 |
17. rgl: 3D visualization support - rgl development has moved to Github.
rgl is a 3D visualization system based on OpenGL. It provides a medium to high level interface for use in R, currently modelled on classic R graphics, with extensions to allow for interaction.
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Registered: 2008-08-16 13:50 |
18. arules - Mining Association Rules - Infrastructure for representing, manipulating and analyzing transaction data and patterns (frequent itemsets and association rules).
arules is now maintained on Github: https://github.com/mhahsler/arules
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Registered: 2007-05-21 13:55 |
19. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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Registered: 2012-08-10 08:48 |
46 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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