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79 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Machine Learning : Bayesian Methods [Filter]
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Registered: 2009-02-18 09:38 |
1. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
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Registered: 2009-02-18 10:01 |
2. RXKCD - This package allows the visualization of your favorite XKCD comic strip directly from R
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Registered: 2011-07-10 13:54 |
3. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
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- Development Status : 4 - Beta [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-06-23 07:05 |
4. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.
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Registered: 2011-11-04 17:46 |
5. getMODIS - The "getMODIS" package is not further developed. Please install the "MODIS" package instead!
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Registered: 2011-08-10 11:10 |
6. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
7. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.
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Registered: 2011-06-10 12:13 |
8. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.
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- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
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Registered: 2007-11-27 09:48 |
9. mixOmics - mixOmics is an R package that supplies different methodologies to unravel relationships between two heterogeneous data sets of size n × p and n × q where the p and q variables are measured on the same samples or individuals n.
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Multivariate Statistics : Projection Methods : Canonical Correlation [Filter]
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Registered: 2010-06-25 04:17 |
10. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes.
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Registered: 2011-06-10 12:24 |
11. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.
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Registered: 2009-06-17 16:54 |
12. lsmeans - Calculate adjusted means and standard errors for main factors and interaction terms of lm, gls, lme and lme4 models.
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- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Genetics : Multiple Testing [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
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Registered: 2009-09-10 11:49 |
13. Plotrix development - Plotrix development and maintenance
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- Topic : Graphics : Colors [Filter]
- Topic : Graphics : Development [Filter]
- Topic : Graphics : Plotting [Filter]
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Registered: 2012-05-03 10:56 |
14. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.
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Registered: 2010-01-08 16:59 |
15. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
16. vcf2geno: reading VCF made easy - Efficiently Read Variant Call Format (VCF) into R
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Registered: 2012-08-22 01:29 |
17. modis - Functions for download, mosaic, re-sample, re-project, analyse and visualise of MODIS grid data. Special attention is given to spatio-temporal change detection and phenological metric extraction.
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Registered: 2011-11-02 22:53 |
18. SPRINT: Simple Parallel R INTerface - SPRINT is a Simple Parallel R INTerface to High Performance Computing (HPC) that enables biologists to run statistical analysis scripts using R in parallel on HPC clusters. It consists of an HPC harness and a library of parallelized R functions.
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Registered: 2009-11-20 16:56 |
19. Extreme Values in R (evir) - Extreme Value in R: Functions for extreme value theory, which may be divided into the following groups; exploratory data analysis, block maxima, peaks over thresholds (univariate and bivariate), point processes, gev/gpd distributions.
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- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Risk Management [Filter]
- Topic : Time Series [Filter]
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Registered: 2011-03-21 13:20 |
79 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
