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84 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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Registered: 2012-07-03 03:50 |
1. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2007-11-27 09:48 |
2. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).
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- Programming Language : Tcl [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2011-05-10 20:54 |
3. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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- Development Status : 4 - Beta [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
4. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2015-02-12 00:09 |
5. RHRV - Package for carrying out heart rate variability studies of ECG records
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Registered: 2010-10-14 10:22 |
6. yags: modular GEE solver - yags is a modular solver for generalized estimating equations.
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2009-01-04 12:17 |
7. modis - Functions for download, mosaic, re-sample, re-project, analyse and visualise of MODIS grid data. Special attention is given to spatio-temporal change detection and phenological metric extraction.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
- Topic : Time Series [Filter]
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Registered: 2011-11-02 22:53 |
8. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods
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- Development Status : 1 - Planning [Filter]
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- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-01-24 12:50 |
9. factorplot - factorplot provides numerical and graphical summaries of factor-level differences in GLMs. It produces all pairwise hypotheses tests with either the exact pairwise difference and variance or user-supplied quasi-variances or floating absolute risks.
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- Development Status : 4 - Beta [Filter]
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- Topic : Graphics [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2011-05-30 16:43 |
10. seriation - Infrastructure for seriation - Infrastructure for seriation with an implementation of several seriation/sequencing techniques to reorder matrices, dissimilarity matrices, and dendrograms. Seriation is now maintained on githup at http://github.com/mhahsler/seriation
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
- Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
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Registered: 2008-02-01 22:32 |
11. cvrcalc - A Cardiovascular Risk's Calculator by Scores
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2013-08-02 12:18 |
12. RMacoqui - RMacoqui develops a probability procedure for the identification of chorotypes, i.e. distribution patterns shared by a group of species, which can be operatively identified within an area (Baroni-Urbani et al., 1978).
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Registered: 2015-07-04 09:37 |
13. TSP - Traveling Salesperson Problem - Basic infrastructure and some algorithms for the traveling salesperson problem (TSP). The package is now maintained on github at http://github.com/mhahsler/TSP
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- Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
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Registered: 2007-02-20 12:47 |
14. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2011-06-10 12:24 |
15. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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- Programming Language : Perl [Filter]
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Registered: 2013-11-21 21:46 |
16. Isolation Forest - This package implements an anomaly detection method that detects data-anomalies using binary trees. Using the property that anomalies are more susceptible to isolation, anomalies can be detected as data points which have short expected path lengths.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Machine Learning : Recursive Partitioning [Filter]
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Registered: 2009-07-14 06:02 |
17. addendum - Utility functions that should have been in R: easy glmnet, pretty graphing and swift debugging and profiling.
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- Topic : Machine Learning : Model Selection and Validation [Filter]
- Topic : Multivariate Statistics : Missing Data [Filter]
- Topic : Regression Models [Filter]
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Registered: 2011-06-17 13:35 |
18. arules - Mining Association Rules - Infrastructure for representing, manipulating and analyzing transaction data and patterns (frequent itemsets and association rules).
arules is now maintained on Github: https://github.com/mhahsler/arules
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- Topic : Machine Learning [Filter]
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Registered: 2007-05-21 13:55 |
19. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.
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Registered: 2010-02-08 16:57 |
84 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
