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73 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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- Development Status : 4 - Beta [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2013-11-21 21:46 |
1. rich - A collection of functions related to species richness estimation and comparison.
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- Development Status : 3 - Alpha [Filter]
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Registered: 2011-01-12 09:06 |
2. lsmeans - Calculate adjusted means and standard errors for main factors and interaction terms of lm, gls, lme and lme4 models.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Genetics : Multiple Testing [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
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Registered: 2009-09-10 11:49 |
3. Regression Modeling Strategies - Regression modeling, testing, estimation, validation, graphics, prediction, and typesetting by storing enhanced model design attributes in the fit. rms is a collection of 229 functions that assist with and streamline modeling.
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- Programming Language : Fortran [Filter]
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Graphics : Applications [Filter]
- Topic : Regression Models [Filter]
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Registered: 2010-11-22 19:09 |
4. Grid-based symbols - Grid-based matplots, boxplots, barplots, stars and symbols for visualization in arbitrary context like maps or cluster solutions.
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- Topic : Graphics : Graphics Systems [Filter]
- Topic : Graphics : Plotting [Filter]
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Registered: 2010-01-11 10:17 |
5. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2013-12-19 15:12 |
6. Sublogo dendrograms - Sublogo dendrograms are statistical graphics that reveal correlation in biological sequence alignments.
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
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Registered: 2009-06-19 09:14 |
7. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters.
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2015-02-12 00:09 |
8. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided.
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- Topic : Chemoinformatics [Filter]
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Registered: 2010-04-25 17:27 |
9. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows.
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2008-08-04 05:27 |
10. d/p/q/r functions of Coxian distribution - The package provides the d/p/q/r functions of a Coxian distribution.
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Registered: 2016-12-08 01:53 |
11. KDE & MDS - Helper functions for plotting KDEs and MDS maps of geochronology and geochemistry data, for visualisation of age distributions and sample comparison.
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Registered: 2014-03-11 14:23 |
12. crop - The package crop provides an interface to system tools (on Unix-like operating systems) to crop graphics.
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Registered: 2015-10-18 18:40 |
13. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.
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- Topic : Computational Physics [Filter]
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- Topic : High Performance Computing : Large Memory [Filter]
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Registered: 2009-06-17 16:54 |
14. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes.
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- Topic : Time Series [Filter]
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Registered: 2011-06-10 12:24 |
15. mixOmics - mixOmics is an R package that supplies different methodologies to unravel relationships between two heterogeneous data sets of size n × p and n × q where the p and q variables are measured on the same samples or individuals n.
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- Natural Language : French [Filter]
- Operating System : Microsoft [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Multivariate Statistics : Projection Methods : Canonical Correlation [Filter]
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Registered: 2010-06-25 04:17 |
16. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.
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Registered: 2010-02-08 16:57 |
17. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
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- Topic : Bayesian Statistics [Filter]
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- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
18. Harmony - This package is a natural language processing (NLP) library that allows users to access large language models and use them to compare datasets where variable names are in unstructured text form. The target users are often academic researchers in the social sciences, such as psychology/mental health. We are actively recruiting contributors. We have an existing Python library also.
The source code is at: https://github.com/harmonydata/harmony_r
The web front-end of the tool is at: https://harmonydata.ac.uk/
What does Harmony do?
* Psychologists and social scientists often have to match items in different questionnaires, such as "I often feel anxious" and "Feeling nervous, anxious or afraid".
* This is called harmonisation.
* Harmonisation is a time consuming and subjective process.
* Going through long PDFs of questionnaires and putting the questions into Excel is no fun.
* Enter Harmony, a tool that uses natural language processing and generative AI models to help researchers harmonise questionnaire items, even in different languages.
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Registered: 2025-02-13 10:40 |
19. wtJonckheere - Non-parametric Jonckheere-Terpstra trend test on weighted data
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Registered: 2014-06-20 10:11 |
73 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
