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43 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.

Development Status : 4 - Beta [Filter]
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Topic : Computational Physics [Filter]
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Topic : High Performance Computing : Large Memory [Filter]

Registered: 2009-06-17 16:54

1. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods

Development Status : 1 - Planning [Filter]
Development Status : 2 - Pre-Alpha [Filter]
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Topic : Environmetrics [Filter]
Topic : Spatial Data & Statistics : Ecological Analysis [Filter]

Registered: 2011-01-24 12:50

2. rGEDI - rGEDI: NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing

Development Status : 4 - Beta [Filter]
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Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]

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Registered: 2020-03-12 20:57

3. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.

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Programming Language : Perl [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Biostatistics & Medical Statistics [Filter]

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Registered: 2013-11-21 21:46

4. RXKCD - This package allows the visualization of your favorite XKCD comic strip directly from R

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Registered: 2011-07-10 13:54

5. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.

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Topic : Bioinformatics : Statistics [Filter]
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Registered: 2013-12-19 15:12

6. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.

Development Status : 3 - Alpha [Filter]
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Registered: 2011-11-04 17:46

7. getMODIS - The "getMODIS" package is not further developed. Please install the "MODIS" package instead!

Development Status : 3 - Alpha [Filter]
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Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
Topic : Time Series [Filter]

Registered: 2011-08-10 11:10

8. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters.

Development Status : 3 - Alpha [Filter]
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Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]

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Registered: 2015-02-12 00:09

9. R2scheme - Compile R code to binary machine code and dynamically link the binary to R using the bigloo scheme compiler.

Development Status : 2 - Pre-Alpha [Filter]
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Registered: 2010-11-03 09:48

10. Extremal Dependence - Extremal Dependence package provides parametric and nonparametric statistical methods for modelling and estimating the dependence of extreme values

Development Status : 5 - Production/Stable [Filter]
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Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

Activity Percentile: 0.00

Registered: 2014-12-02 11:09

11. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.

Development Status : 4 - Beta [Filter]
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Topic : Environmetrics [Filter]
Topic : Multivariate Statistics : Multivariate Distributions [Filter]
Topic : Spatial Data & Statistics [Filter]

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Registered: 2010-02-08 16:57

12. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp

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Topic : Bioinformatics [Filter]
Topic : Genetics [Filter]
Topic : High Performance Computing [Filter]

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Registered: 2013-05-29 18:34

13. Hadoop Streaming - Provides a framework for writing map/reduce scripts for use in Hadoop Streaming. Also facilitates operating on data in a streaming fashion, without Hadoop.

Development Status : 3 - Alpha [Filter]
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Registered: 2009-03-19 14:46

14. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package.

Development Status : 5 - Production/Stable [Filter]
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Topic : High Performance Computing : Parallel Computing [Filter]

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Registered: 2010-11-19 22:28

15. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.

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Topic : Bioinformatics : Medical Science [Filter]
Topic : Genetics [Filter]

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Registered: 2011-03-23 10:20

16. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.

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Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
Topic : Optimization : Mathematical Programming : Linear Programming [Filter]

Activity Percentile: 0.00

Registered: 2007-11-27 09:48

17. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.

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Topic : Bioinformatics : Visualization [Filter]
Topic : Genetics [Filter]

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Registered: 2010-01-08 16:59

18. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.

Development Status : 4 - Beta [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

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Registered: 2010-04-01 17:54

19. Tools for Uplift Modeling - The R Package tools4uplift integrates some tools for exploring and modeling uplift. The content can be separated into the following steps of statistical modeling: quantization, visualization, model selection and model validation.

Development Status : 4 - Beta [Filter]
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Topic : Graphics : Plotting [Filter]
Topic : Machine Learning : Model Selection and Validation [Filter]
Topic : Regression Models [Filter]

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Registered: 2018-08-31 21:23

43 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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