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58 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.
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- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
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- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Activity Percentile: 0.00
Registered: 2007-11-27 09:48 |
1. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
2. SPRINT: Simple Parallel R INTerface - SPRINT is a Simple Parallel R INTerface to High Performance Computing (HPC) that enables biologists to run statistical analysis scripts using R in parallel on HPC clusters. It consists of an HPC harness and a library of parallelized R functions.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2009-11-20 16:56 |
3. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters.
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2015-02-12 00:09 |
4. Protocol for Adjust & Select Models - This project is about modeling species abundances in communities.
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Registered: 2011-01-18 16:54 |
5. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.
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Registered: 2011-06-10 12:13 |
6. modis - Functions for download, mosaic, re-sample, re-project, analyse and visualise of MODIS grid data. Special attention is given to spatio-temporal change detection and phenological metric extraction.
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Registered: 2011-11-02 22:53 |
7. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods
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- Topic : Environmetrics [Filter]
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Registered: 2011-01-24 12:50 |
8. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2011-06-10 12:24 |
9. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2013-11-21 21:46 |
10. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.
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- Topic : Multivariate Statistics : Multivariate Distributions [Filter]
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Registered: 2010-02-08 16:57 |
11. cran2deb - debianize CRAN - cran2deb automatically converts CRAN packages for R into Debian packages, handling dependency matching and package updates nicely.
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Registered: 2008-09-11 19:33 |
12. Variant Pattern Analyzer - VPA (Variant Pattern Analyzer) is an R package for prioritizing variants with user-specified frequency pattern from multiple study subjects in next generation sequencing study.
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Registered: 2011-08-05 14:30 |
13. R2scheme - Compile R code to binary machine code and dynamically link the binary to R using the bigloo scheme compiler.
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Registered: 2010-11-03 09:48 |
14. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.
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Registered: 2011-11-04 17:46 |
15. RXKCD - This package allows the visualization of your favorite XKCD comic strip directly from R
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Registered: 2011-07-10 13:54 |
16. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
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Registered: 2011-06-23 07:05 |
17. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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Registered: 2012-08-10 08:48 |
18. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.
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Registered: 2009-02-18 10:01 |
19. Polyphase - This method accepts the genotype data, the relative physical position of the markers for species of any ploidy and returns the phased output.
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Registered: 2016-02-18 15:57 |
58 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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